Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2183 ATGGCCAATCGCTGGCTCAGGCCCGAGGTGTATCCACTGTTCGCCGCGGTTGGTGCTGCTGTTGGGATCTGTGGGTTCCAACTGGTTCGTAATATCTGCATCAACCCTGAAGTCAGGGTGAACAAGGAGGGCAGGAAGGCGGGAGTGTTGGAGAATTTTGCTGAGGGAGAGAAGTATGCCGAGCATTTCCTGAGGAAGTATGTGCGCAACAGAGCTCCAGAGATTATGCCCTCCGTCAACAGCTTCTTCGCTGACACAAGTCGCAACTAA 270 0.537 MANRWLRPEVYPLFAAVGAAVGICGFQLVRNICINPEVRVNKEGRKAGVLENFAEGEKYAEHFLRKYVRNRAPEIMPSVNSFFADTSRN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2183 89 PANTHER G-BOX BINDING PROTEIN 2 87 - -
Ssu1g2183 89 PANTHER OS07G0274700 PROTEIN 2 87 - -
Ssu1g2183 89 Pfam NADH-ubiquinone reductase complex 1 MLRQ subunit 7 73 IPR010530 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2183 Ssu-Chr1 62116290 62117852 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2183 - - gmx:100500534 182.956