Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2182 ATGCAATCTCTGTCGCTTACGCTGAGCAAGAGGCTCTCCAATTCCAAGCTTCTTTTCAGAATCTCATCCCACCTCGTCCCCTACACATCCTCCACCACCGCCTCTTCCTCCTCTCCTCCGCCACCTTCGCCGCCGATCCCCGCTCCCTCCGCTCTCAACAACCTCCTCATCGCTCCGTGGTCCGCAACTCAATCCCGCGGAATCACACTCTCTGGATCTGATGCTAGAGTCGGGAATCTCGTTGGAAACCGAGGAGACGCTCACGAGGTTCCGCCTCACACTGTAGCTGGTTATGCAACAGTTGCTACTACAGAGGATGACATCAAAAGGAAGGAACGAAACAGTGCATTGAGGAATGAAACGAAGACAAAGAGAGAGCAGCTCCTGAAAGTTACTGCAGTTGCCCCTCTTCTTTTAATATACCCGAACGCCTATTCATTGCTCTTGgcaaatttctttttgttctgGCACATAAATGCGGGGATCGAAGAGATTTTGGCAGATTATGTTCACCATGAAATGACCAGAGAATTTGTCATGATTTCTCTCAGATTGTTCTTGATAATCGCAATGAAGgatgttttcttaaaatttatatttgtataa 606 0.4571 MQSLSLTLSKRLSNSKLLFRISSHLVPYTSSTTASSSSPPPPSPPIPAPSALNNLLIAPWSATQSRGITLSGSDARVGNLVGNRGDAHEVPPHTVAGYATVATTEDDIKRKERNSALRNETKTKREQLLKVTAVAPLLLIYPNAYSLLLANFFLFWHINAGIEEILADYVHHEMTREFVMISLRLFLIIAMKDVFLKFIFV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2182 201 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 130 191 IPR034804 GO:0016020
Ssu1g2182 201 MobiDBLite consensus disorder prediction 29 49 - -
Ssu1g2182 201 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 2 200 - -
Ssu1g2182 201 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 119 197 IPR034804 GO:0016020
Ssu1g2182 201 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 2 200 IPR044963 GO:0005743|GO:0005749|GO:0006099|GO:0006121
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2182 Ssu-Chr1 62102704 62107906 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2182 K25801 - gmx:100500565 275.018