Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2178 ATGAAGGACCTTCAGAAATATAGAGAAATGTGGGAGCATCAAAATGTGGGTTTCTACGATGGCTTCAGGGAGCACAAGAAAGCCGAGGACTTCAAAGCAAATGTGAAGAGGCTAGAGCTGGCGGGTGTGTGGGATGAGATCATTGAAAAGCTAAGAAGTTATGAACTCCCAGATGAATTTGAAGGcaagaaagaaataattgattttgggACAAGGTTTCGCTACCTAGTAGAGCCTCTAGATATTGCCAATTATTACCGACATGATAGACATTACGAGGATGATGCTTCTTCTTACATGGTTAAGGGAAGGCCAAAACGATATAGGTACCCCCAAAGATGGTTGGAACATGCCGAGAGAAGGCCACAAGAACCTAACTCCGCATCTTGCTTCTGGGCTGAGGTGGAGGATCTTCGCTACAAAATCGGTACTAATAATAGCTCATTTGAAGATGTTAAGGAAAGGGTTGACCAATTAGAGGCTCAAATAAAAGCATGGAGCGAAAAAGGGGAACTGGCTAAGGATGTCTTCTTGGAGGGTTCTACCTTGGTGAAGTGGTGGAAGGCTCTACCTCTACATCACAAGCAACAATCATGCATTAGAAGTCTTATTAAATAG 618 0.4191 MKDLQKYREMWEHQNVGFYDGFREHKKAEDFKANVKRLELAGVWDEIIEKLRSYELPDEFEGKKEIIDFGTRFRYLVEPLDIANYYRHDRHYEDDASSYMVKGRPKRYRYPQRWLEHAERRPQEPNSASCFWAEVEDLRYKIGTNNSSFEDVKERVDQLEAQIKAWSEKGELAKDVFLEGSTLVKWWKALPLHHKQQSCIRSLIK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2178 205 Coils Coil 149 169 - -
Ssu1g2178 205 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 204 - -
Ssu1g2178 205 Pfam Enhanced disease susceptibility 1 protein EP domain 3 202 IPR041266 -
Ssu1g2178 205 PANTHER PROTEIN EDS1-RELATED 1 204 IPR044214 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2178 Ssu-Chr1 62077269 62077886 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2178 K18875 - gmx:100820237 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2178 1 62077269 62077886 Ssu1g2178 1 62077269 62077886 ECH