Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2176 ATGGCAGGAGGGTCCCTTGGAGACAACATGGGATTGAAGGAAGAGCTCATCACCGTGGCGTGTGGTTTGGCCTTCCAAGCTCACACGGCACCAGGGAATCTCTACCGTTACAATGACATTGGGATTTCTTCGGAAGCTTATCGTGTTTTCAGCTTCTCGGGGTCTTGGGACGCCGCTGAATGGTTTGTTAACAAACCTTTTGGGGAAACGAAGATAGACCTTGCCCTGTTTCCTTCACTTAGAAGTATTGGCAATGATGAAGCGGCTCTAGTGAACGAAGGCTTCGCAAAGAGATTCGATAACATATTGAAAACTACCACGATTAAATCCGAGGTGAATAAGGCTATGGTAGATAGGAAGCAAGTGGTGTTTACGGGGCACTCCTCTGGTGCGGCAATGGCCATTCTTGCAACGTTTTGGGCCCTGGAAGAGTACCTTAACCCAACCAAAACCCATAACCACAAGCCTCCCTTTTGTGTCACTTTTGGGTCTCCCTTAATTGGCAATCATATATTCTCTCACGCTTCAAGGCGAGAAAATTGGTCTCGCTGTTTCATACACTTTGTATTGAGATATGACATAGTGCCACGGATTTTGCTTGCTCCCTTCTCTTCTATTGAGCAAACTTTTAGCTCTATTCTCCAATTCTTGGACCCCATGTTCGGACCTGATAGAAGAGGCAGTGTGATTTCTGAGTTTTACTCCACTGTGATGAGAAACGCAGCAACTGTTACAAGCCATGCTGCCGGTACTCTCATGGGCAGCACAAATTTGTTATTCGAGACAGTGACCAATTTTGTTGACTTAAGCCCTTATAGGCCCTTTGGAACCTACGTTTTCTGCAACGGAAATGGCCAGCTGATTGTGGTGAGAAACTCAGATGCTGTTTTGCAACTCATGTTCCACACTGCTCAGCTAAGCAATTTGGAAGAGCTTCCGGAAGTTGCCAACAATAGCATATCGCAACACCTGGCCTATGTGGCTGAATTGCAAGAAAGCTTGGGAATGCAGAATGTAGTGTACTTGGAGCAACTTGAGAACTTCCCCTGTCTGCGGATGGTTCTAATAGTGATGTTGCAACAATTAGCGCAGCCTTGGATGGCCTTGGACTGGGAGCATAAGAGAGACGAGGACTTCCACGCAAATGTGACGAGGCTAGAGCTGGCAGGTGTGTGGGATGAGATCATTGAAAAGCTAAGGAGTTACGAACTCCCAGATGAATTTGAAGGCAAGAAAGAATGGGTTGATCTTGGAACAAGGTTTCGCCTACTAGTGGAGCCTCTAGATATTGCCAATTATTATCGTCATGCGAGGCATTACGAGGATGGTTCTTCTTCTTACATGGTTAGGGGAAGGCCAAAACGATATAGGTACACCCAAAGATGGTTGGAACATGCCGAGAGAAGGCCCCAAGAACCTAGCTCTACATCTTGCTTCTTTGCTGAGGTGGAGGATCTTCGCTACAAAACAAGTAAGAGTAATAGCTCATTCGAAGATGTTAAGGAAAGGGTTGAGCGATTAGAGGTTCAAATAAAAACATGGAGTGATGAAGGGAAACTGGCTAAAGATGTCTTCCTGGAGGGTTCTGTCTTGGTGAAGTGGTGGAAAACCCTACCTCCACAACACAAGCAACAATCGTGCATTAGAAGTTTAATAAATGAGTGA 1665 0.4583 MAGGSLGDNMGLKEELITVACGLAFQAHTAPGNLYRYNDIGISSEAYRVFSFSGSWDAAEWFVNKPFGETKIDLALFPSLRSIGNDEAALVNEGFAKRFDNILKTTTIKSEVNKAMVDRKQVVFTGHSSGAAMAILATFWALEEYLNPTKTHNHKPPFCVTFGSPLIGNHIFSHASRRENWSRCFIHFVLRYDIVPRILLAPFSSIEQTFSSILQFLDPMFGPDRRGSVISEFYSTVMRNAATVTSHAAGTLMGSTNLLFETVTNFVDLSPYRPFGTYVFCNGNGQLIVVRNSDAVLQLMFHTAQLSNLEELPEVANNSISQHLAYVAELQESLGMQNVVYLEQLENFPCLRMVLIVMLQQLAQPWMALDWEHKRDEDFHANVTRLELAGVWDEIIEKLRSYELPDEFEGKKEWVDLGTRFRLLVEPLDIANYYRHARHYEDGSSSYMVRGRPKRYRYTQRWLEHAERRPQEPSSTSCFFAEVEDLRYKTSKSNSSFEDVKERVERLEVQIKTWSDEGKLAKDVFLEGSVLVKWWKTLPPQHKQQSCIRSLINE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2176 554 CDD Lipase_3 49 211 - -
Ssu1g2176 554 SUPERFAMILY alpha/beta-Hydrolases 47 202 IPR029058 -
Ssu1g2176 554 Pfam Enhanced disease susceptibility 1 protein EP domain 373 549 IPR041266 -
Ssu1g2176 554 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 372 554 - -
Ssu1g2176 554 PANTHER PROTEIN EDS1-RELATED 1 349 IPR044214 GO:0006952
Ssu1g2176 554 PANTHER PROTEIN EDS1-RELATED 372 554 IPR044214 GO:0006952
Ssu1g2176 554 Gene3D alpha/beta hydrolase 41 234 IPR029058 -
Ssu1g2176 554 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 349 - -
Ssu1g2176 554 Pfam Lipase (class 3) 49 199 IPR002921 GO:0006629
Ssu1g2176 554 Coils Coil 497 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2176 Ssu-Chr1 62045014 62047596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2176 77 212 Acyl Lipid Metabolism Gene Families AT5G14930 31.618 9.49e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2176 K18875 - gmx:100820237 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2176 1 62045014 62047596 Ssu1g2176 1 62045014 62047596 ECH