Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2148 ATGGACACTGAGACAGGTAGAAGTAGAAGACGGGTTGGAACAACAAGCTCATCAGCAGCACCGCCAGTGGCTGAAGAGATCGTACCTAATTGGGGATGGACAGAGGACCATTCAGGCCATTTTCTTCTTGTAGATCTTCCTGAATTCAGGAAGGAGGAGGTGAAGCTTCAGGTTGATGGCTCCACTGGCCGTATAATTGTAGAAGGCGAAAGGCAAACAAATGAACAGAAACGTGTTCACTTTGAGCTGACATTTCCGGTGCCAGCGGATTCAGATATGGATAACATATCCGGAAACTTTGATAGTGAAATCCTTCACGTGTACGTTCCCAAGCGAACTTCACAAGAGCACAGAGAAAGCGAGATAGAGAAAGCCTCAAATGGCAATGTTGAAAGGCCACAAGAAATTGAAAGTGAGGAACCCAATGTTGTTAACGAGGAGAGGGATCGTGCTCCTGCGCGACAGGGATAG 471 0.4713 MDTETGRSRRRVGTTSSSAAPPVAEEIVPNWGWTEDHSGHFLLVDLPEFRKEEVKLQVDGSTGRIIVEGERQTNEQKRVHFELTFPVPADSDMDNISGNFDSEILHVYVPKRTSQEHRESEIEKASNGNVERPQEIESEEPNVVNEERDRAPARQG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2148 156 CDD ACD_sHsps-like 33 111 - -
Ssu1g2148 156 Gene3D - 26 148 IPR008978 -
Ssu1g2148 156 SUPERFAMILY HSP20-like chaperones 17 123 IPR008978 -
Ssu1g2148 156 MobiDBLite consensus disorder prediction 111 156 - -
Ssu1g2148 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 14 125 IPR002068 -
Ssu1g2148 156 PANTHER HEAT SHOCK PROTEIN 26 9 148 IPR045045 -
Ssu1g2148 156 MobiDBLite consensus disorder prediction 1 23 - -
Ssu1g2148 156 Pfam Hsp20/alpha crystallin family 34 120 IPR002068 -
Ssu1g2148 156 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 9 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2148 Ssu-Chr1 61154154 61155465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2148 - - gmx:100802285 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2148 1 61154154 61155465 Ssu1g2148 1 61154154 61155465 ECH