Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2114 ATGGTTACAAAAGGGAACCCAGGGGACAATAGAAATAACAGGAGTTCAGCGTCTGTTTTCATCATAGTTGGCTTGTGTGGTTTCTTCTATATATTGGGTTTGTGGCAACGGAGTGGTTTTGGAAAAGGAGACAGCATAGCTGTTGAGATTACTAAACAGACAGATTGCAGTGTTCTCTCTGATCTAAACTATGAGACCCACCATGATGATGATGCCGGAACAAATGATGGTTCCAACACCCAAGTCAGGGAGTTCAAGCCGTGTGATGATCGCTACATTGATTACACGCCTTGTCATGATCAAGGGCGAGCAATGACATTTCCCCGAGAAAATATGGTTTATAGAGAAAGGCACTGTCCTCCCGAtgaagaaaaattgtattgtcTCGTACCTGCCCCCAGAGGATATGCAACACCGTTTCCATGGCCCAAGAGTCGTGATTATGTACCATATGCAAATGCGCCTTACAAGAGCCTGACAGTTGAGAAGGCTGTGCAGAATTGGATACAGTATGAAGGAAATGTTTTCAGGTTCCCTGGCGGCGGAACGCAGTTTCCCAAGGGAGCTGATGCTTACATCGATGAACTTGCATCTGTTATTCCATTGGACAATGGGATGGTTAGAACTGCGTTGGATACTGGCTGTGGGGTTGCTAGTTTTGGTGCATACctgtttaagaaaaatgttgttACAATGTCAATTGCACCAAGGGATTCTCATGAAGCCCAAGTTCAATTTGCTTTGGAAAGAGGCGTTCCAGCAATCATTGGTGTTCTTGGAACAATAATGCTGCCCTTCCCTTCTGGAGTTTTCGACATGGCACATTGTTCTCGCTGCTTGATTCCATGGGGTGGAAATGATGGAAAGTACTTGAAGGAAGTTGACCGGGTTCTTAGATCTGGTGGTTACTGGATACTTTCTGGTCCTCCTATCAACTGGAAGAATAACTACCAAGCATGGCAACGTCCTGAATATGAGCTTGAGGAGGAGCAACGGCAGATTGAGGATGTTGCTAAACTTCTTTGCTGGGAAAAGAAATATGAGAAGGGTGAAATTGCAATCTGGAAAAAAAGATTACATAATGATGATTGCAGTGAAAAAGATACTCAACCTACAATGTGTGAAACCACTAATTCTGATGATGTCTGGtacaagaaaatggaagattGTGTAACTCCTAGTAAACCTAGTGGTTCATGGAAGCCATTCCAAGAGAGACTCAATGCTGTTCCTTCAAGAATTACCAGTGCATCTGTTCCTGGTGTATCTGTGGAAGCATTTGAAGAGGACAACCGATTATGGAAGAAGCATGTGAATGCTTACAAACGGATCAACAAAATCATTAGCTCAGGGAGGTATCGCAACATAATGGACATGAATGCTGGTCTGGGAAGTTTTGCTGCTGTACTGGATTCTCCCAAATTATGGGTTATGAATGTTGTGCCTACAATTGCTGAGAAAGCTAACCTAGGGTGTTATATTTGA 1485 0.4215 MVTKGNPGDNRNNRSSASVFIIVGLCGFFYILGLWQRSGFGKGDSIAVEITKQTDCSVLSDLNYETHHDDDAGTNDGSNTQVREFKPCDDRYIDYTPCHDQGRAMTFPRENMVYRERHCPPDEEKLYCLVPAPRGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPKGADAYIDELASVIPLDNGMVRTALDTGCGVASFGAYLFKKNVVTMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGVFDMAHCSRCLIPWGGNDGKYLKEVDRVLRSGGYWILSGPPINWKNNYQAWQRPEYELEEEQRQIEDVAKLLCWEKKYEKGEIAIWKKRLHNDDCSEKDTQPTMCETTNSDDVWYKKMEDCVTPSKPSGSWKPFQERLNAVPSRITSASVPGVSVEAFEEDNRLWKKHVNAYKRINKIISSGRYRNIMDMNAGLGSFAAVLDSPKLWVMNVVPTIAEKANLGCYI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2114 494 Gene3D Vaccinia Virus protein VP39 162 367 IPR029063 -
Ssu1g2114 494 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 492 IPR004159 GO:0008168
Ssu1g2114 494 PANTHER METHYLTRANSFERASE PMT18-RELATED 4 492 - -
Ssu1g2114 494 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 487 IPR004159 GO:0008168
Ssu1g2114 494 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 332 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2114 Ssu-Chr1 60430433 60433163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2114 - - gmx:100807547 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2114 1 60430433 60433163 Ssu1g2114 1 60430433 60433163 ECH