Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2109 ATGGCTAAGCTTGTCTGTGTTCTGCTTCTGGCACTCCTTGGCATTTCCATGATCACAACTCAGGTTATGGCAAAAGATGCTGCTTATCACTTGGACGGAGGGAATTATGGACCCGGGAGTCTAAAGAGCTCACAGTGCCCGTCTGAATGCTCGAGAAGATGTAGCCAGACACAGTACCACAAGCCGTGCATGCTCTTCTGTCAAAAATGCTGCAAAACGTGCCTGTGTGTTCCTCCTGGCTACTATGGGAACAAGTCTGTGTGCCCCTGCTACAACAACTGGAAGACCAAGCGTGGAGGACCCAAATGCCCTTGA 315 0.5048 MAKLVCVLLLALLGISMITTQVMAKDAAYHLDGGNYGPGSLKSSQCPSECSRRCSQTQYHKPCMLFCQKCCKTCLCVPPGYYGNKSVCPCYNNWKTKRGGPKCP 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2109 104 Pfam Gibberellin regulated protein 45 104 IPR003854 -
Ssu1g2109 104 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 104 - -
Ssu1g2109 104 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2109 Ssu-Chr1 60051981 60052870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2109 - - gmx:100805590 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2109 1 60051981 60052870 Ssu1g2109 1 60051981 60052870 ECH