Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2108 ATGACGAGACGAAAATGGCGAAGCGGGGAGACTCCGACGAAGTGTGGTGGCGACAAGGCAGCTAGTGGGGAAGCCGGGAATAGTAGAGTCAATTACAGGTGTCTTGTTCATTTGCATGAACCCATTGCAATAAAAACCAAAGtttcttcctttttcctctACTGTCCGAATGTGAAGACATTGCACAGTGATGAAGTGATTGCTGCATCAACCTCAATCGTCAGGTTGCTTTCGTTGGACCTTGCTTGGTCTTCAGCAATGTCAGAGAAGGCCATGGGTCACTCAAGGTTTATATTTTGCGTGATGCTCATTTCTATGTTCCTTTTGGTCCTGTCTTCCCTTTTCCTACTCCAGTTCAGCAGTCATTCTTTGATACCTAGATCAGTGTTAGAACTTATTCTTGTCAATAATGCGTCACTTTACTTCATGCCCAATTTgaagagagaagaaattatACTCCCTCCCTACCCTTCTGGggatttaaattttcaatcacaAAACCCCAGAGAATCTGACTGTCAATCTTCCAATTCAAGCCACAAAACATCTTCTGTAGGACAGGAGATGAATATGGCATCGCACCCAACTCGGCCTTTATTGAGAGTATTCATGTATGACTTGCCTCCAGAATTTCAGTTTGGGTTATTGGGTTGGAAGGGAAGTGTGAATCAAACATGGCCTGAGGTGGATAACCCCAAACATATCCCACGATATCCAGGTGGTCTGAACTTGCAGCACAGCATGGAATACTGGCTCACCCTTGATCTTCTATCGTCACACACGGCAAAAGTTGGCCAGCCTACCACTGCAATTAGAGTGCAGGATTCAAGTCAAGCGGATGTAATTTTTGTGCCGTTTTTCTCATCTCTGAGTTACAATCGGCATTCCAAGCTTCATGGAGAGGAAAAAGTTAGTGTTAACAAAATGTTGCAAGACAGATTGGTACAGTTCTTAATGGGCAGGAAAGAATGGAAACATTCAGGAGGGAAGGATCATCTAATTGTGGCCCACCATCCTAACAGCTTGCTGGATGCAAGAAGAAAGTTGGGTTCTGCTATGCTTGTGCTTGCAGATTTCGGAAGGTATCCTGCTGAATTAGCAaatatcaagaaagatataaTAGCCCCCTACAGGCACCTAGTGGGCACTATACCAATAGCTGAATCAGCTTCATTTGAAGAGCGTACCACACTGGTGTATTTCCAGGGGGCAATATACAGGAAAGATGGAGGAGCCATTCGCCAAGAACTGTACTACCTCCTCAAAGATGAGAAAGACGTGCATTTCACATTTGGGAGCATAGGAGGAAATGGGATCAATCAGGCAAGCCAGGGCATGGCCTTGTCAAAATTCTGCCTCAACATTGCTGGGGATACCCCATCGTCGAATCGCCTCTTTGACGCCATAGTAAGCCACTGTGTTCCTGTGATCATTAGTGATGAAATTGAGCTACCCTTCGAAGATGTCTTGGACTACTCAGACTTCTCCTTATTTGTCCGTGCCTCTGACGCCGTGAAGAAAGGCTACTTGTTGAATCTCCTTCGATCAATCACACAGGACGAGTGGACCAAGATGTGGGAAAGATTGAAGGAGATTGCTCATCACTTTGAGTATCAGTATCCATCCCAACCTGGGGATGCAGTGAATATGATTTGGCAGCAAGTTGCACATAAGATATCTTCAGTAAGGTTCAATTTGCACAGAAAGAACAGATACCAGAGATCTCAGCTTCGTGTTAAGACCAACTGA 1749 0.4345 MTRRKWRSGETPTKCGGDKAASGEAGNSRVNYRCLVHLHEPIAIKTKVSSFFLYCPNVKTLHSDEVIAASTSIVRLLSLDLAWSSAMSEKAMGHSRFIFCVMLISMFLLVLSSLFLLQFSSHSLIPRSVLELILVNNASLYFMPNLKREEIILPPYPSGDLNFQSQNPRESDCQSSNSSHKTSSVGQEMNMASHPTRPLLRVFMYDLPPEFQFGLLGWKGSVNQTWPEVDNPKHIPRYPGGLNLQHSMEYWLTLDLLSSHTAKVGQPTTAIRVQDSSQADVIFVPFFSSLSYNRHSKLHGEEKVSVNKMLQDRLVQFLMGRKEWKHSGGKDHLIVAHHPNSLLDARRKLGSAMLVLADFGRYPAELANIKKDIIAPYRHLVGTIPIAESASFEERTTLVYFQGAIYRKDGGAIRQELYYLLKDEKDVHFTFGSIGGNGINQASQGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSDFSLFVRASDAVKKGYLLNLLRSITQDEWTKMWERLKEIAHHFEYQYPSQPGDAVNMIWQQVAHKISSVRFNLHRKNRYQRSQLRVKTN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2108 582 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 88 571 IPR004263 GO:0006486|GO:0016757
Ssu1g2108 582 Pfam Exostosin family 199 512 IPR040911 -
Ssu1g2108 582 MobiDBLite consensus disorder prediction 1 25 - -
Ssu1g2108 582 MobiDBLite consensus disorder prediction 163 190 - -
Ssu1g2108 582 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 88 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2108 Ssu-Chr1 60027303 60032238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2108 - - gmx:100795371 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2108 1 60027303 60032238 Ssu1g2108 1 60027303 60032238 ECH