Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2107 ATGGTTTCTTTCTCCTGGGGTTGTTTTGGATCAAAAACACTTTTCACGTTTTCATTGCTTCTTCATTCAGGCTATGAGCAACAAGAAATAGGAGACAAGACAAACATTTTGAGACACACCACCTTCTCTTCTTTGCTTCAAACAGAGAAAGCTTTTGTTCCTCCAAAATTTCCAAAAGATATGAGTTTCTTGACTTTCAGAggattcttttttttagtttgtgttGGGATTTTAGCTTCTCAACCATGCATGGTTTCTGGCCTGAGAAGCAAAGATCTTGCTCTGAGATGGGATAGCAGGCAATCGCCACTTGTTCAAATGGTTCGTATCCTAAAGACTGTTGCAATGGAGGATTTGCAATCACAGCTGGATTTGGCACCTGCACCTTCAATGACATTTGATCCtaatcaatcaaacaaaaggACAGTTCGAAAAGGGTCAGACCCAATTCACAATAGAAGTTAA 465 0.3699 MVSFSWGCFGSKTLFTFSLLLHSGYEQQEIGDKTNILRHTTFSSLLQTEKAFVPPKFPKDMSFLTFRGFFFLVCVGILASQPCMVSGLRSKDLALRWDSRQSPLVQMVRILKTVAMEDLQSQLDLAPAPSMTFDPNQSNKRTVRKGSDPIHNRS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2107 154 PANTHER CLAVATA3/ESR (CLE) GENE FAMILY MEMBER MTCLE11 61 154 - -
Ssu1g2107 154 MobiDBLite consensus disorder prediction 126 154 - -
Ssu1g2107 154 MobiDBLite consensus disorder prediction 126 143 - -
Ssu1g2107 154 PANTHER CLAVATA3/ESR (CLE)-RELATED PROTEIN 45 61 154 IPR038821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2107 Ssu-Chr1 60025050 60025986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2107 - - pvu:PHAVU_009G187200g 155.992