Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2103 ATGAAGTTCCATCTGGCGCTAGTTATTACAATAGGCATAATTTTTGGAATTGGGCTTGAGGGGTGCCAATGCAAGGTTGTGCAGTTCATTTTTGGAGACTCCCTCTCGGATGTTGGAAATAACAAGTACCTCTCTAAAAGCCTTGCTCAGGCAAGTTTACCTTGGTATGGTATTGACTTGGGCAATGGACTACCTAATGGCAGGTTCTCCAATGGTCGCACGGTTGCTGATATAATAGGTGACAATATGGGCCTTCCTAGGCCTCCAGCATTCTTGGACCCATCTTTAACTGAAGATGTTATATTGGAAAATGGGGTGAATTATGCTTCTGGGGGTGGTGGCATATTGAATGAAACTGGCAGTTATTTTATTCAAAGGTTTTCTCTCTACAAACAAATTGAGCTGTTTCAGGGGACACAAGAACTGATTAGAAGCAGAATTGGAAAAGAGGAGGCAGAAAAGTTTTTCCAGGGAGCTCATTATGTTGTTGCTTTAGGCAGCAATGACTTCATCAACAACTACTTGATGCCTGTTTACAGTGATTCATGGACATATAATGATGAAACCTTCATGGACTACTTGATAGGAACTCTACTAGAACAATTAAAGCTACTGCATGGCCTAGGAGCAAGGCAGCTGATGGTGTTTGGGCTGGGCCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTTAGTACATCTGGGGATTGTCAAGATAGAACAAACAAGTTGGCTATTAGCTTTAATAAAGCTGCAAGCAAGTTAGTAGATGACTTGGGAAAGCAACTTCCCAATTCAACCTACAGATTTGGAGATGCATACGACGTTGTTAATGATGTGATTAGCAACCCAAACAAATACGGATTCCAAAACACAGACTCACCGTGTTGCTCCTTCGGGAATATTCGACCGGCTCTTACATGTATACCTGCATCAAAACTGTGCAAAGATAGAAGCAAGTACCTATTTTGGGACGAGTACCATCCCTCGGACAGAGCTAATGAGCTAATTGCCAATGAGCTCATTAAGAAATTTGGATTTTTGCGAGTTGATAAATCAAAACCTCCTTCACCATCACCCGCTCTTGCTCCATCCTCAGAAGATTAA 1104 0.4248 MKFHLALVITIGIIFGIGLEGCQCKVVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDLGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLTEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRSRIGKEEAEKFFQGAHYVVALGSNDFINNYLMPVYSDSWTYNDETFMDYLIGTLLEQLKLLHGLGARQLMVFGLGPMGCIPLQRVLSTSGDCQDRTNKLAISFNKAASKLVDDLGKQLPNSTYRFGDAYDVVNDVISNPNKYGFQNTDSPCCSFGNIRPALTCIPASKLCKDRSKYLFWDEYHPSDRANELIANELIKKFGFLRVDKSKPPSPSPALAPSSED 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2103 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 355 - -
Ssu1g2103 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 355 - -
Ssu1g2103 367 SUPERFAMILY SGNH hydrolase 29 344 - -
Ssu1g2103 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Ssu1g2103 367 Gene3D SGNH hydrolase 27 344 IPR036514 -
Ssu1g2103 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2103 Ssu-Chr1 59941158 59943969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2103 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 33.968 2.61e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2103 - - gmx:100803991 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2103 1 59941158 59943969 Ssu1g2103 1 59941158 59943969 ECH