Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2097 ATGGCATGTTCCTTGAAGAGTGTTTTGTGTGTTCCCGAATTGAATGAGGGCATGCTTGGATCCAAAACCAAAGGGGTTTTGGTGCCTTGTCCCTCGAAAACTGGCAAAGCAAAATCAGGGGATTGTTCTGTTTTGAGCAATGCTTTCATGGGAAAATCTATTGCTCTTGATGAAAAAGGCTCAGGGTATTGCAGTTCAAAAGCCTCCAGCAATGTCCCTGTTCATGTACAAGCAACAATTTGTGTTAGTAAGGCTTTGAAGTGGTGGAAGAAGAGCCTAAAGCCTAATATGGTTGAGATCCACTCAGCGCAAGAACTGGTCCATTCTTTGCTCAACGCTGGTGATTCGTTGGTTGTGGTTCATTTCTATTCACCTGGTTGTGGAGGCTGCAAAGCCCTTCACCCTAAGATCTGTCAAATAGCTGAATTGTACCCAAATGCAATCTTTCTGAAAGTCAATTACGAGGAGCTGAAAACCATGTGTCACGGTTTGCGCATTCACGTGTTACCCTTCTTCAGGTTCTATAGAGGTGCGGAGGGTCGAGTTTGTAGCTTCAGCTGTACCAATGCAACTATCAAGAAATTTAAGGATGCCTTGGCAAAGCATGGGAATGAACGGTGTAGTTTTGGCCCAGCAAAAGGTTTGGACGAATCCGAGTTGAAAATTTTGGCTTCTGTTGGTGAAATCTCGGTTAATTCTCCTCCGTTACTATATTCCAAACAAGGGAAATTGGAGGATTTGGTCACGGAGAGCCATGATTTTTCTGGCGTTTGGAGCATGGCATGTAATAGCAGGGTGCTGATTTGA 807 0.4424 MACSLKSVLCVPELNEGMLGSKTKGVLVPCPSKTGKAKSGDCSVLSNAFMGKSIALDEKGSGYCSSKASSNVPVHVQATICVSKALKWWKKSLKPNMVEIHSAQELVHSLLNAGDSLVVVHFYSPGCGGCKALHPKICQIAELYPNAIFLKVNYEELKTMCHGLRIHVLPFFRFYRGAEGRVCSFSCTNATIKKFKDALAKHGNERCSFGPAKGLDESELKILASVGEISVNSPPLLYSKQGKLEDLVTESHDFSGVWSMACNSRVLI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2097 268 PANTHER THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC 1 257 - -
Ssu1g2097 268 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 257 - -
Ssu1g2097 268 CDD TRX_family 113 200 - -
Ssu1g2097 268 Pfam Thioredoxin 108 181 IPR013766 -
Ssu1g2097 268 Gene3D Glutaredoxin 88 204 - -
Ssu1g2097 268 ProSiteProfiles Thioredoxin domain profile. 66 228 IPR013766 -
Ssu1g2097 268 SUPERFAMILY Thioredoxin-like 87 203 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2097 Ssu-Chr1 59748207 59749328 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2097 - - gmx:100801871 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2097 1 59748207 59749328 Ssu1g2097 1 59748207 59749328 ECH