Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2081 ATGTCATCATGGCCTTTTATGGCTTTAGAGGGTATTTTCATTGCTTACTTGTACTCACTTTTCATCACCATTGACACAATTGTGAGCTGCATGTTTTACAAAAGCTGCAAGGTAGGATTGCGGGGTGGTCAGGAAGAAAAGCATTTTTTGAGGATTGAATTCCCAGAGGAGGACAATTGTGGTTACTTGATTCATGAGCATTCACTGGATGCAGATGATTCCCGAGTGATCATGAGAAGCATCCATGCTGGGTTTAAATTTGGCCTTTCCAGAGTATTCTTCTGTGAATGA 291 0.4124 MSSWPFMALEGIFIAYLYSLFITIDTIVSCMFYKSCKVGLRGGQEEKHFLRIEFPEEDNCGYLIHEHSLDADDSRVIMRSIHAGFKFGLSRVFFCE 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2081 96 PANTHER OS08G0107100 PROTEIN-RELATED 2 64 - -
Ssu1g2081 96 PANTHER PROTEIN, PUTATIVE-RELATED 2 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2081 Ssu-Chr1 59327849 59330022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2081 - - gmx:100797246 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2081 1 59327849 59330022 Ssu6g1237 6 20201342 20202322 ECH
Ssu1g2081 1 59327849 59330022 Ssu1g2081 1 59327849 59330022 ECH