Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2070 ATGGCATTATTGGGCATGAGTGCAAACAGGCAATGCAATGACTATTTCCCAGGATATCATTCCCCGATGGATCTTGTCTTTGGCGCTGAAGGCAGCACATGGACCTCATCTAATAGTAACAGTGAACGTAAGAATGACTGTTACCAAATTGATTCCTTGCCATTGTCGTCAACTTGTCACCTTTTAGGATACAACAAGGAACTTCTGAAACAGACAATACTCAAGCATGAAGCCATATTTAGGGACCAAATTCATGAGCTTCACCGCATTTACCAGAAACAAAGGGAATTAATGGATGGAATCAAAAGGATTGAGTTACATAAACATAGTTTAAGGTTGGAGACATCATCGTCAAGTTCCTCTTTGTATTACTCACAAAACTTGCCTTGGTTGACTAGTCAATCATCTTTTTTAAATGCCGAAGGCATCCAGTTACCATTGGCTTCTATGCAAGAAAAGAGCAGGCAATTATGTTGTACTCCTGCTCCTGCTCCTGCTCCTGCTCCAACTGCAATCAAAGAATCTTTAAAAGATCCTAAACTATCAGGCTCAACTTACAGAACAGTTGGTAAGAAAATATTGGATCTTCAACTTCCGGCTGATGAGTACATTGATAGTGAAGGTGAATCTTGTGAGAATGAAAGGGTTATCAAAGAGCCCCCATTGTCAACTTATACTTTAAATGGAATGTCTAAGGTTGTGTATAATACTGATGAGAAACCGTATGGACCCAATTCTAATGGTTTTACCGACTTAAATTTACCATTTAAGCTTGAAGAAGAGACAGGTGTAAAGTCTCATGATTTTGGGGCCTCAATCCATCGCAGAAACGTTACCTTTCATGATATGCCTGGGAAAATGACACTAGGCTCTCATTATTTGCCCAATGATGTCATCcagaatttgaaaagaaaacaggATCTTGAAGGTTGCTCAGATCCCTCACTACCAAACCAGGGGGAAAAACATGGATGGCTGCCCTCGGTACTAGTGCTGGTAAGAACTTATCTCCAAAGTTGCATTGTGgttattataatacatatctTGTACTAG 1053 0.3894 MALLGMSANRQCNDYFPGYHSPMDLVFGAEGSTWTSSNSNSERKNDCYQIDSLPLSSTCHLLGYNKELLKQTILKHEAIFRDQIHELHRIYQKQRELMDGIKRIELHKHSLRLETSSSSSSLYYSQNLPWLTSQSSFLNAEGIQLPLASMQEKSRQLCCTPAPAPAPAPTAIKESLKDPKLSGSTYRTVGKKILDLQLPADEYIDSEGESCENERVIKEPPLSTYTLNGMSKVVYNTDEKPYGPNSNGFTDLNLPFKLEEETGVKSHDFGASIHRRNVTFHDMPGKMTLGSHYLPNDVIQNLKRKQDLEGCSDPSLPNQGEKHGWLPSVLVLVRTYLQSCIVVIIIHILY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2070 350 PANTHER - 4 328 - -
Ssu1g2070 350 PANTHER GB|AAF67766.1 4 328 - -
Ssu1g2070 350 Pfam Plant protein of unknown function (DUF863) 174 328 IPR008581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2070 Ssu-Chr1 58936284 58938005 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2070 - - gmx:102666418 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2070 1 58936284 58938005 Ssu1g2070 1 58936284 58938005 ECH