Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2068 ATGGTTTCTGAGACAATCCAGTCCAAGAACGTGTGTGTGATTGGAGCTGGACCATCGGGGCTAGTGGCAGCGAGGGAGTTGAGAAAAGAGGGTCATAAGGTGGTTGTGTTGGAGCAGAATCATGATGTTGGAGGGCAGTGGCTATATGAAGCAAATGTGGAAGGGGAGGACCCTTTAGGGAGAAAGCCTTTTCTAAAGCTGCATAGCAGTATCTACGAATCTTTGAGGCTCACATCTCCACGTGAGATCATGGGATTCACTGATTTTCCATTTTTGGTCAGGAAGGGTAGAGACATGAGGAGGTTCCCTAGCCATGCAGAGCTGCTTCATTACTTAAAGGACTTTTGTGAATGCTTTGGCTTGGGAGAGATGATAAGGTTCAACACAAGGGTGGAGTATGTGGGAATGTTGGATTATGGTGTCTGTAGCAATGATCTGAAGTGGGTTGTTAGAAGCATAGATAAGAAGAGTGAGAAGGTGGTGGAAGAGGTATTTGATGCAGTGGTTGTGGCCACTGGTCATTACTCTCAACCAAGATTGCCCTCCTCCATTAAAGGAATGGATACAtggaaaaggaaacaaatgcATAGTCACATTTATAGGACCCCAGAACCATTCCGCAATGAGATTGTGGTGGTGGTTGGAAACTCCTTAAGTGGACAAGACATATCAATAGAGCTTGTGGATGTAGCAAAGGAAGTCCATATGAGTTCTAGATCTCTTAAAATCTCTGAGGGTTTATCTAAAGTCATATCCAAACACGAGAACTTTCATCTTCATCCACAGATAGACAGACTTCAAGAGGATGGGCGGGTCACATTCATAGATGGTTCTTCCATTTTTGCAGACTCTATTTTGTACTGCACAGGGTACTCCTATGCATTACCCTTTCTTGACACCAAAGGAATGGTGGTTATAGATGATGACAGAGTGGGCCCATTGTATGAGCACACTTTCCCCCCATCACTTGCtccatctctctcttttatagGTATCCCTAGAAAGATCATAGGATTCCCTTTCTTTGAGTCCCAAGCAATATGGATAGCTCAACTACTTTCCGGGAAAAAAGTATTGCCATCATGGGAGGAAATGATGAAATCCATCAAGGAATTCTACCATTCAAGAGAAGCAGCAGGCATTCCCAAGCACTGTACTCATGAAATTGCAAACTTTGagTACTGTGACAAATACGGGGAGAATGTGGGGTTCCCACGTATAGAAGAATGGAGGAAACAGCTATGCATATCAGCCATAATTAACGCTGATGTCAACTTGGAGACATATCGAGATTCGTGGGACGATGATGAGCTGCTCCAAGAGGCCCTTCAAAGCCTTCACTTCAACCAACTTCGACTTGAAGATTCTGCCATGtaa 1377 0.4299 MVSETIQSKNVCVIGAGPSGLVAARELRKEGHKVVVLEQNHDVGGQWLYEANVEGEDPLGRKPFLKLHSSIYESLRLTSPREIMGFTDFPFLVRKGRDMRRFPSHAELLHYLKDFCECFGLGEMIRFNTRVEYVGMLDYGVCSNDLKWVVRSIDKKSEKVVEEVFDAVVVATGHYSQPRLPSSIKGMDTWKRKQMHSHIYRTPEPFRNEIVVVVGNSLSGQDISIELVDVAKEVHMSSRSLKISEGLSKVISKHENFHLHPQIDRLQEDGRVTFIDGSSIFADSILYCTGYSYALPFLDTKGMVVIDDDRVGPLYEHTFPPSLAPSLSFIGIPRKIIGFPFFESQAIWIAQLLSGKKVLPSWEEMMKSIKEFYHSREAAGIPKHCTHEIANFEYCDKYGENVGFPRIEEWRKQLCISAIINADVNLETYRDSWDDDELLQEALQSLHFNQLRLEDSAM 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2068 458 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Ssu1g2068 458 Pfam Flavin-binding monooxygenase-like 259 395 IPR020946 GO:0004499|GO:0050660|GO:0050661
Ssu1g2068 458 PANTHER DIMETHYLANILINE MONOOXYGENASE 4 452 - -
Ssu1g2068 458 SUPERFAMILY FAD/NAD(P)-binding domain 258 416 IPR036188 -
Ssu1g2068 458 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 PRINTS Flavin-containing monooxygenase (FMO) signature 222 237 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 Gene3D - 11 432 IPR036188 -
Ssu1g2068 458 Gene3D - 183 288 IPR036188 -
Ssu1g2068 458 PIRSF FMO 243 406 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 PIRSF FMO 7 256 IPR000960 GO:0050660|GO:0050661
Ssu1g2068 458 SUPERFAMILY FAD/NAD(P)-binding domain 8 250 IPR036188 -
Ssu1g2068 458 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 4 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2068 Ssu-Chr1 58922699 58926144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2068 - - gsj:114416580 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2068 1 58922699 58926144 Ssu1g2068 1 58922699 58926144 ECH