Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2053 ATGTCATCGCACGCTAATGATCCCCGTCAGCCATCGGCGGCGAGACCCTACGTGGCGCCGCAGGTTTCGCCGCAGGACCTCCCGATCGACTATGCCGGTTTCATCGCCGTCATATTCGGCGTCGCCGGCGTCATGTTCAGGTACAAACTGAGCTCGTGGCTGGCGCTCATTTTCTGCGCGCAATCCGTCGCGAACATGAGGAATGTCGAGAATGACCTCAAACAAGTTATGATGGCTATGATATCTGCGGATCTGATTGTGGGAAtcGAACCTGATAAGCAGATGAAAGAGTCTTCTGACACTCGAGTCAATAATTTCTGGATCATTCCTCGGGACTATGCCCCTATTTATGGGTTTGAAAAGAGTGGTTTTGGTAATTACACTTATGCTTGGTCATCTCTTGTGGATGAGGGAAATCTTAATAGGATCAGGATTGATGCTTGA 444 0.4955 MSSHANDPRQPSAARPYVAPQVSPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSVANMRNVENDLKQVMMAMISADLIVGIEPDKQMKESSDTRVNNFWIIPRDYAPIYGFEKSGFGNYTYAWSSLVDEGNLNRIRIDA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2053 147 Pfam PAT complex subunit Asterix 5 81 IPR005351 GO:0030176|GO:0044183|GO:0045048
Ssu1g2053 147 PANTHER CGI-140 2 91 IPR005351 GO:0030176|GO:0044183|GO:0045048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2053 K24963 - gmx:100500245 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2053 1 58269775 58270787 Ssu1g2053 1 58269775 58270787 ECH