Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2052 ATGCCTGGAAACGAAGTAGGAGACAGGgtccataatttttttggtcaagAGAACCTGTCCCAGGGACAATATCATTCTCAGGTGGTTGATGGGAACTGGCCAGGACTAAGCAACAATTTGTGGGCTGGTAGCCAGAGACCAACTGGTGTGccttttttttccaatttgaagaattttaatCAACAGCAATCTGATCCTGAGCTGGGACACACAAGCTCTCCACATTTGCGACATGGTTTGAACCTATCTCAGTCTAGTTTGAGGCCTGAGTCTGGCAGAAATCTGCTGCCAAACCAACAATCAGCTGTGAATGGCTATATACAGGGACAACAGGTTTTTCAGACCAGGCAGAATGAAGCTAACATTTTGGGAGTGGACACAGAATCTGATTGGCATAGTCTGTCAAGAGGAATACCAAGGCTGGAGTCACAAGGGAGTGGTCTTGAACTCTATAAGAAAAACTTGGCTAGGAATGATGCTGCTGAATCTCCtgtcaattttgatttttttggagGTCAACAGCAGATAGGTGGACGGCATGGTGGGATGCTTCAACCTTTACCTAGACAGCAGTCAGGAATAAATGAAATGCATCTATTACAGCAGCAAGCAGTACTTAACCAGATGCAAGAACTTCAGAGGCAGcaacaatttcatcaattaGAAGCGAAGCAACAGAACTCTATGACTCCAGCTTCTTCCATTTCAAAACAGGCAGTTGCAAGCCATTCTGCATCTCTCATCAGTGGCATTCCCATTAATGAAACATCTAACCTTATATGGCAGCCTGAAGTTATACCAACTAATGCTAATTGGCTCCAGCATGGTGCCACTCCAGTTCTGCATGGGTCCTCTAATGGACTTATGTTATCCCCCGAACAAGGACAGGCATTGCGCTTGATGGGTTTGGTTCCTAAGCAGGGTGATCAGTCTCTTTATGGGGTCCCAATTTCTGGTTCAAGAGGCACTCCTAACCTGTATTCTCATGTTCAAGCAGAGAAGCCTGCAGTGCCTCAGGTTTCTATCCCTCACCAGTATTCTCATGTTCCTGGGGACAAACCTGCACTGCAGCAGATATCAATTGGTGATaattccttttctcctcatcaATATGCTGCGTTTTCAGACCAAATTAACACAAATGATGGGACTTCAGTTTCAGGGCAGgatattcaaggaaaaaatatgtttggttctacTATTCACAGTATAAATAGTGGACTGAATATGGAGAACTTGCAGCAAGTGAATTCTGAGCCAAGAATTGTACCAATGCAAGATTTTCATGGGAGACAAGAACTAGCTGGATCTTTGGAGATGTCGCAGGACAATATGCTAGTGCAGGCCCCTTCACAGAACATGGCTACCTTAGATCCAACTGAAGAGAAGATTTTGTTTGGTTCAGATGACAACCTGTGGGATGGATTTGGCAGGCATGCAGGTGGTTTCAATATGCTGGATGGTACAGATAGTTTTGGTGGGTTTCCAACTATTCAGAGCGGGAGTTGGAGTGCTCTTATGCAGTCTGCTGTAGCAGAAACTTCTAGTAGTGACATAGGCAAACAAGAGGAGTTGAGTGGTCCAAGTTTCAGGAATATGGGGCGGTCATCTGGAAATGAGTGGCCTTCAACTATTGATAGCAGCAAACAGCAATCTGTTTGGACTGACAGCAACTTGCAATCAGCATCCAGCATAAATTCAAGACCTTTTCTTCGGCCTAATGATGTTTGTAGGCCGAATGCCACTGAAAATTATTCTGGTGTTTCTGGGTTTCATCAGTCAGGCTCTGATACTTTGCATGAACAGCATGACAGGTTACAGAACAATTCTCAGAGATCAATTCCACAGTTTTTAGAAAGAGGCAAATGGTTAGATTGCAGTCCTCAGCAAAAACAACTTGCGGAAGGGGGTCATATATATGGAAATGCTGCTAACTCTTCAGGTTTAGAAAAAAACATATTGTTAGGGAATAGTAGTGGTGATCCTTTCAATAAATCTAATGGATGGGATATTATGAAATCGCCACCATTTGATAGGAGttcaaatttcaaaacccatgaaaatgaaaacttatTGCAGCCCCTTAACGAGAAAGCCATGCATGAGATGGGCCAGGTTCCTGCTATGTGGGAGCCTGATTCTGATACTAATTCATCTGTTGGAATGGAACATGTGAAGTCTGCAGGTAATATGCTGGTTTGTGGGGAAGATTCTGGTACAAATGGTATTGCTCAATTGCCAAATTCAGGCACTCCATGGTTCAGCCGGCAAAGCAGCAAGCAGCTCCCTAACGTTGATGTATGGAGGGCTGCAGAGTCAGCGGGGAGCTATAGAAGAAATGAAGGTCCAGGAAAGTATAAGCATCATATGGAGAAGAACCCCTTAGTTTTGGAATCATCAAAGAATGGAAAGGTAGATGGTGAGACGCATGATTTGGAGAACtctaacaaaaaggaaaagtcaGCAAATGGTCTTGGCTCTAATCCTTCCCTTCCTAGAGCTGGTGGTATGAGAGAAAATACCAGTTTTGATGGCAATAATTTGCATAGTCCACAGTTATCTGGTCAGGGAAATCGAAGACCTCCTGTAACTCGTAAATTTCAGTATCACCCAATGGGCGATCTGGGTGTTGAAGTGGAACCTTATGGAAACAAACATGTTATAAATTCACAGCCTATGCCCCAGCAACCCTTTGGAGGACTTAAAGGTCAGGACCAAAGCTATCTTGGACAGTCAAAATTTGATCATTCTGACAggaattttaatgaaatgaataaGGGTGACTCAAAAAGCTTGGATAATAATGCTTCAAAAAGTACACTCCCTGGtcaaatgtcaaaaaaattaacctcaTTGGATAGAAGTGTTGGGAATTATGCCTCACAGAAGACTGCTTCACCCAGGGTGCCTGAAACTGAATCTTCTGATGGATCTGTTGTACATCCTCAGCAGAATCAGAGTTATTTGTCTCAGGGCTTTGGTTTACAATTGGCTCCTCCTACTCAAAGGCTTCCTGTGGTATCTTCTCGTGGCTCATTGGAGACAGATCATACCACACCACATGTGTCTGAGACAAGGGATAAGGACCATACATGGTTGGGTACTAATCAAACTTTACCTTCTCGAGATCCATCTCATGGGGAGCTTAGGAGTAATATTTCTAGCACTGCAGGACATATTTTTGATAAGGCCTCACAATACGGTATGCTGGGAAACATTCCACAGGCTTTTACATCTGGCCTTCCTTTCTCCAGAATCCATACTCAAAATCAGAATTTGACAAATCTTGGTGGACAAGTAGCAAATACTCAATCTGCTAATGTAAATTTCACTGCTTCCATGAATCAGACagatgaattttgtgaaaaggcTCAAACTAGCCAATCTGAATTGGCTTCTGCTCAGGACATGTCCCAGCTGAGTGGTATAGACCAAGATCGTCTGAGAGATCCTGCCATCCAAAATTTGACAGCAGAGGCTGGCACTCAGCCTTCTGTTACATTTAGTGCATCTCCACATGGCACCCCTTCAAAAGTTATGCACAATGTATGGACCAGTGTTTCTAGCAAGCAACATCTTAATGCTTCAAGGTTTCTATCCCAGCCCCAACAAATTTATGATTGTGAAATGACAACTGGGTCACAGAAGCCAGGTGATGAGGGTTTGGAGAAAGATGGTAACGATCTTTCTGGTACTGGTCCATGTTCTGCTTACTCCAATAGTTCTGTGGGAAATTCGCTTAAAGAAATCTCTCTGCAGCAGACGTTGCCTGAGAGTTTTGTTGCTGCTGAAGAGGCTGCAGGTGCATCACACCTGAAGGAACCTTTTGGGAAGCATATGTTTGATGCATCTCAACCTAGTCCAGCTGCTACCTCCAGAGATATTGAGGCTTTTGGCCGATCTTTAAGGCCAAACGTTGTTTTGCATCATAATTTCTCTTTGTTGGATCAAGTTCAATCCATGAGAAATGTGGAGACTGATCCTAGTAATCGGGATGTCAAGAGATTGAAGGTTTCTGATAATGTGGTGGACAAACAGCTGGTAGATTCAAACCATGGGCAACAGTTGTCATATGGATATGATAATGTGGTCAAAGATGGGTCAGGTAATAATTCCATGCCATCTTCAGATCCTAATATGCTAAGCTTTTCAACAAAGCCACTTGATGGACAGGACACACATGCATCTTCTCAAGAGGAGGTTGGTTATGGTCAGAAAAATGCTCTTAATGTCTCTGACAATAATAAAGCAACTTCTGTTAACAGTGATTATTCTCTGGTAAATCCTCAGATGGCACCATCATGGTTTGAGCGATATGGAACTTTAAAGAATGGTAAGATGTTGCCAATGTATAATGTACAGAAGATGACTGCTTCTAAGATTATGGACCAGCCTTTCACTGTACCAAACCAATCAGACAGTTTGCGTTTTCATAATTCAATAGAGCAAATTAACAGTGTCAGTGATGCTCACCTAAATAATGCTAGGCAAAGTACAATGCCTGCTTCAGTCGCAAGTGAGCATGTAGATTCTCAGTTATCGGCTCCTGCTGTTGAGCATGACTTACTTATTATGAGACCGAAGAAGCGAAAAAGTGCCACATCTGAACTCCTACCATGGCATAAAGAACTGTTACAGGGTTCTGAAAGGCTTCGAGATATCAGTGCGGCAGAATTAGACTGGGCTCGAAGTGCAAATAGACTGATTGAGAAGGTTGAAGACAATGTGGAGATAGTTGAAGATTTGTCAGCAGTGGCGAAGTCAAAAAGAAGACTTGTCTTGACTACACAGCTTATGCAGCAACTACTTAGCCCTCCTCCAGCTGCAGTTCTTGTAGCAGATGTGAAGCTGCATCATGAGAGTGTGGTCTACTCCGTTGCCAGATTAGCATTAGGAGAAGCATGCAGTTCAATCTCATGGTCCAGATGTGATACACTTTTGCCTCCTGGCGACAAGAACCTGCTGCCTGAGAAGTGTAAATCATCCGATAAAATTGATCATTACATTTTGAAAGTTACAGACTTTGTTGGTAGAGCAAGGAAACTGGAAGATGATGTATTGAGATTGAATAGCAAAGCCTCAATTTTGGACTTGAGAGTGGAATGTCAGGATTTAGAAAGATATTCTGTGATCAATCGATTTGCCAAGTTCCATGGACGGGGACAAAATGATGGGGCAGAGGCCTCATCATCTTCTGATGCAAATTCTAATGCTCAAAAATCGTTCCCCCTAAAATATGTTACTGCAGTTCCATTGCCTAGGAATCTCCCAGACAGGGTACAATGTCTTTCACtttga 5298 0.4137 MPGNEVGDRVHNFFGQENLSQGQYHSQVVDGNWPGLSNNLWAGSQRPTGVPFFSNLKNFNQQQSDPELGHTSSPHLRHGLNLSQSSLRPESGRNLLPNQQSAVNGYIQGQQVFQTRQNEANILGVDTESDWHSLSRGIPRLESQGSGLELYKKNLARNDAAESPVNFDFFGGQQQIGGRHGGMLQPLPRQQSGINEMHLLQQQAVLNQMQELQRQQQFHQLEAKQQNSMTPASSISKQAVASHSASLISGIPINETSNLIWQPEVIPTNANWLQHGATPVLHGSSNGLMLSPEQGQALRLMGLVPKQGDQSLYGVPISGSRGTPNLYSHVQAEKPAVPQVSIPHQYSHVPGDKPALQQISIGDNSFSPHQYAAFSDQINTNDGTSVSGQDIQGKNMFGSTIHSINSGLNMENLQQVNSEPRIVPMQDFHGRQELAGSLEMSQDNMLVQAPSQNMATLDPTEEKILFGSDDNLWDGFGRHAGGFNMLDGTDSFGGFPTIQSGSWSALMQSAVAETSSSDIGKQEELSGPSFRNMGRSSGNEWPSTIDSSKQQSVWTDSNLQSASSINSRPFLRPNDVCRPNATENYSGVSGFHQSGSDTLHEQHDRLQNNSQRSIPQFLERGKWLDCSPQQKQLAEGGHIYGNAANSSGLEKNILLGNSSGDPFNKSNGWDIMKSPPFDRSSNFKTHENENLLQPLNEKAMHEMGQVPAMWEPDSDTNSSVGMEHVKSAGNMLVCGEDSGTNGIAQLPNSGTPWFSRQSSKQLPNVDVWRAAESAGSYRRNEGPGKYKHHMEKNPLVLESSKNGKVDGETHDLENSNKKEKSANGLGSNPSLPRAGGMRENTSFDGNNLHSPQLSGQGNRRPPVTRKFQYHPMGDLGVEVEPYGNKHVINSQPMPQQPFGGLKGQDQSYLGQSKFDHSDRNFNEMNKGDSKSLDNNASKSTLPGQMSKKLTSLDRSVGNYASQKTASPRVPETESSDGSVVHPQQNQSYLSQGFGLQLAPPTQRLPVVSSRGSLETDHTTPHVSETRDKDHTWLGTNQTLPSRDPSHGELRSNISSTAGHIFDKASQYGMLGNIPQAFTSGLPFSRIHTQNQNLTNLGGQVANTQSANVNFTASMNQTDEFCEKAQTSQSELASAQDMSQLSGIDQDRLRDPAIQNLTAEAGTQPSVTFSASPHGTPSKVMHNVWTSVSSKQHLNASRFLSQPQQIYDCEMTTGSQKPGDEGLEKDGNDLSGTGPCSAYSNSSVGNSLKEISLQQTLPESFVAAEEAAGASHLKEPFGKHMFDASQPSPAATSRDIEAFGRSLRPNVVLHHNFSLLDQVQSMRNVETDPSNRDVKRLKVSDNVVDKQLVDSNHGQQLSYGYDNVVKDGSGNNSMPSSDPNMLSFSTKPLDGQDTHASSQEEVGYGQKNALNVSDNNKATSVNSDYSLVNPQMAPSWFERYGTLKNGKMLPMYNVQKMTASKIMDQPFTVPNQSDSLRFHNSIEQINSVSDAHLNNARQSTMPASVASEHVDSQLSAPAVEHDLLIMRPKKRKSATSELLPWHKELLQGSERLRDISAAELDWARSANRLIEKVEDNVEIVEDLSAVAKSKRRLVLTTQLMQQLLSPPPAAVLVADVKLHHESVVYSVARLALGEACSSISWSRCDTLLPPGDKNLLPEKCKSSDKIDHYILKVTDFVGRARKLEDDVLRLNSKASILDLRVECQDLERYSVINRFAKFHGRGQNDGAEASSSSDANSNAQKSFPLKYVTAVPLPRNLPDRVQCLSL 1765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 886 982 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 579 607 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 840 861 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 781 795 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 1209 1237 - -
Ssu1g2052 1765 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 1765 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 775 863 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 888 915 - -
Ssu1g2052 1765 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 1 1765 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 1347 1401 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 579 596 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 927 982 - -
Ssu1g2052 1765 Coils Coil 1562 1582 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 1017 1031 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 1364 1401 - -
Ssu1g2052 1765 Coils Coil 209 229 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 1006 1048 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 803 818 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 54 95 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 514 559 - -
Ssu1g2052 1765 MobiDBLite consensus disorder prediction 1032 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2052 Ssu-Chr1 58224444 58249389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2052 - - gmx:100800079 3028.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2052 1 58224444 58249389 Ssu1g2052 1 58224444 58249389 ECH