Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2050 ATGGGGGGAGAGGAGAAGCGCCACCAGATGATGCAGAACCTCTTCGGCGACCAAtcggaggaggaagaagagttCGATTCCGAACACGAATCCAACCCCCAACTCAATTACCCCTCCGACGGGGAGGGAGCGGGGGAGCAGGAGGGCGAGGGCGAAGTGGAGGGTCAGGGCGAGGTCGAAATAGAGAGCGACGGAGACGGAGAGCACGACCGCGAGAGCGAGGCCGAGAGGGAGCAAAGCTCGCAGGAGGTGGAAGTTGgggagagagaagagagtgaggGAAGAGACTCGGACAGTGACGCCAAAGACGACGACGACGGTTACAGCCAGCGCGGCGTCACGAGCAAGCGCAGGGACAATGTCGTTGAGAGCGGATCTGAGAGGTCGGAGGAGAACCATTACGCTCCCCACGACGACGAGGAAGAAGAAGTCGATGAAGCCAGAAGCCCCagtgGGTCACCCAGAGATGAAAAAGATGAGACTCATGACTTGCATTCGGCCCCTGAAATTCGTGATGTATTTGGTgattttgatgatgatgaagaggaGGAAATGGGGTATCCAGTTCAGCAGGAACAAGATTCAAATAGATATCCTGTGGAAGAGGAAGGAAGTTATGGAAAGAACCTGAGACCAGAAGATATACTCGCTGATGAAGATCATCAGTATGAATCGGAGGAGGAAAACATTGAGATGAAAACTAAAGAGAAGCCACTTGGGCCCCCATTAGAGTTAGAGGTTCCATTGCGACCACCTCCAGCTCTTCCAGAAAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTTGATCCAAAACCATTTGATCCTAAAACATATGTGGAAGAGGATACTTTTGTAACTGATGAATCTGGAGCCAGAAAACGCATACGTTTGGAGAACAATATTATACGCTGGAGGACTACTAGAAATGCTGATGGCACACCATCTTATGAAAGCAATGCTCGCTTTGTGAGGTGGTCTGATGGCAGTCTGCAGCTATTACTTGGGAATGAAGTTCTAGACATATCAGTGCAAGATGCACAGCATGATCAAGCACATCTTTTCCTTAGACATGGAAAGGGAATCCTCCAATCACAAGGAAGGTTATTAAGGAAAATGAGGTTTATGCCATCTTCCTTGTCATCAAATTCTCATCGGCTCTTGACTGCTCTTGTGGACTCAAGGCATAAGAAGGTTTATAAGGTTAAAAACTGCATTACTGACATTGATCCTGAGAgggaaaaagaggaaaaagagaagGCTGAAAGTCAAAATATCCGGGCTAATGTGCTTCTTAACCGAAAGCGTGAAAAGGTGAACCGGAAGTATACTCCAGCTGTGGAGAGGAGGCGTCAACTTTCTCCTGGGTTTTTAGAGGATGCTTTGGATGAGGAGGAAGAAACAGATTATTATGATTCTCGTCGTTCTCAGCGCCACTTTGAGGAAGATTTGGAAGCGGAAGCCCGGGCAGAGAAACGAATTATGAATGCTAAAAAGTCACAGGGACCCAGAGATATCCCTCGTAAGTCTTCCTTCCCACCTGCTAAATCCTCTCGGAACCCAGTGGGTTACCCAGATGATGAGAGAGAGGAGTCAGAGTATGAAACTGATGACGAGGAAGATGAGAGGCCTCCTTCACGTAAGAGGGATGAGGATACTGAGCCAGAGTATGAGGacgaggaagaagaggaagaacaCTATGAAGAAGCAGAACAAGTTAATGATGCATCAGAAGAGGAGGAACCAAAGCAAAAGAGTAAGGAGTTTAGAGGCAGCGTCAAAAGGAAGGGATTTGAATCTGATGAGGACTCTCCTCCAAGGAAAACAACCACCCATCGGCGAATGGCGGTTGTGTATGACAGTGATGAGGAATGA 1878 0.4515 MGGEEKRHQMMQNLFGDQSEEEEEFDSEHESNPQLNYPSDGEGAGEQEGEGEVEGQGEVEIESDGDGEHDRESEAEREQSSQEVEVGEREESEGRDSDSDAKDDDDGYSQRGVTSKRRDNVVESGSERSEENHYAPHDDEEEEVDEARSPSGSPRDEKDETHDLHSAPEIRDVFGDFDDDEEEEMGYPVQQEQDSNRYPVEEEGSYGKNLRPEDILADEDHQYESEEENIEMKTKEKPLGPPLELEVPLRPPPALPEKMNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGARKRIRLENNIIRWRTTRNADGTPSYESNARFVRWSDGSLQLLLGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKREKVNRKYTPAVERRRQLSPGFLEDALDEEEETDYYDSRRSQRHFEEDLEAEARAEKRIMNAKKSQGPRDIPRKSSFPPAKSSRNPVGYPDDEREESEYETDDEEDERPPSRKRDEDTEPEYEDEEEEEEHYEEAEQVNDASEEEEPKQKSKEFRGSVKRKGFESDEDSPPRKTTTHRRMAVVYDSDEE 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2050 625 Coils Coil 419 439 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 578 625 - -
Ssu1g2050 625 Coils Coil 561 581 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 196 213 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 147 173 - -
Ssu1g2050 625 PANTHER LEO1 PROTEIN 2 625 IPR007149 GO:0006368|GO:0016570|GO:0016593
Ssu1g2050 625 PANTHER BNAANNG06810D PROTEIN 2 625 - -
Ssu1g2050 625 Coils Coil 216 236 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 496 625 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 555 577 - -
Ssu1g2050 625 Coils Coil 482 502 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 447 482 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 1 213 - -
Ssu1g2050 625 Pfam Leo1-like protein 261 420 IPR007149 GO:0006368|GO:0016570|GO:0016593
Ssu1g2050 625 MobiDBLite consensus disorder prediction 45 61 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 174 188 - -
Ssu1g2050 625 MobiDBLite consensus disorder prediction 62 135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2050 K15177 - gmx:100791454 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2050 1 58144865 58152190 Ssu1g2050 1 58144865 58152190 ECH