Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2031 ATGGAAGCGTTGATGAGTTCTGGGACCAACACGGTTCGTGTTTTTGGCGTTAGAAAGCACCAATCTCGTTTTCTTCCTTCATTAACGCTGCATCTGAGGAATAGGAACAGTGTGTGTGGAATTGGAATTGGGGTtgtggagaagaagaagaaggagaagaagcaGTGTCTCGTTGTGGCTGCTTCTGTTGGGGGCTCCAAAGTGGGCCATTTTGAGAACACTCTCCCTTCCAAAGAGGTTCTTGAGCTATGGAGAAATGGTGATGCTGTGTGCTTTGATGTGGATAGCACTGTGTGTCTGGATGAAGGGATTGATGAGCTTGCTGAGTTCTGCGGGGCTGGAAAGGCTGTTGCTGAATGGACTGCTAGAGCGATGGGTGGTTCTGTTCCGTTTGAGGAAGCCTTGGCTGCTAGGCTGTCTTTGTTCAATCCCTCTTTATCTCAACTTCAGAATTTTCTTGAGCAAAAGCCCCCAAGGCCTTCCCCTGGCATTGAACAGTTAGTCCAGAAGTTAAAGGCTAATGGCATGGTTGTTTATCTGATCTCTGGTGGCTTCCGTCAAATGATCAATCCTGTTGCATCAATACTTGGGATTccacaagaaaatatttttgccAATCAATTACTTTTTGGAAGCTCTGGAGAGTTTCTAGGGTTTGATAAAAATGAGCCTACTTCAAGGAGTGGAGGAAAAGCAGTTGCTGTCCAACAAATCAAGAAGGCTTATGGTTACAAAGTTTTAACTATGGTGGGAGATGGTGCAACTGATTTTGAGGCTCGTAGACCAGGTGGTGCTGACTTGTTCGTTTGCTATGCGGGTATTCAACTTCGAGAATCTGTTGCTGCAAAAGCTGATTGgctagttttcaattttaaagacCTCATAAATTCGTTGgggtaa 900 0.4167 MEALMSSGTNTVRVFGVRKHQSRFLPSLTLHLRNRNSVCGIGIGVVEKKKKEKKQCLVVAASVGGSKVGHFENTLPSKEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFNPSLSQLQNFLEQKPPRPSPGIEQLVQKLKANGMVVYLISGGFRQMINPVASILGIPQENIFANQLLFGSSGEFLGFDKNEPTSRSGGKAVAVQQIKKAYGYKVLTMVGDGATDFEARRPGGADLFVCYAGIQLRESVAAKADWLVFNFKDLINSLG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2031 299 PANTHER PHOSPHOSERINE PHOSPHATASE 66 298 - -
Ssu1g2031 299 CDD HAD_PSP_eu 88 291 - -
Ssu1g2031 299 Gene3D Phosphoserine phosphatase; domain 2 100 150 - -
Ssu1g2031 299 Gene3D - 151 298 IPR023214 -
Ssu1g2031 299 Pfam haloacid dehalogenase-like hydrolase 88 261 - -
Ssu1g2031 299 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 89 260 - -
Ssu1g2031 299 PANTHER BNAA06G12800D PROTEIN 66 298 - -
Ssu1g2031 299 SUPERFAMILY HAD-like 79 298 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2031 K01079 - gmx:100814193 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2031 1 57738460 57742156 Ssu1g2031 1 57738460 57742156 ECH