Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2026 ATGGAATCTGTACGTAACAGTGGATCTAGTGCTGATATGAGAACTGGTCTTTCAACAAATTCAGGCGAAGGAGAACaatttaacaaagaaaagaaacaagtaCCCTCCTCTTCACCCTTTTCATCAGAGTTGACATCACAAGATCACTTTGACTTTATGACAAATGCAACAACCACTACGACCCATCCTAGACCTCTAGGTGCAACCTCTCCTATACATGACCAAACATACTTACAGTCCGAATTGCATCACACACATTCAGTGGCAGAAAAGGGAGATGGAAGGCCAGTTAATAGCCATTTAGAAGCACATCCTGCTAACCCTTTTGGTGAAGCTCATCATTCTCCATTAGCAAATAACACAGCTCCCTCTTCATCATCACAAAACCCCTTCCTACTGATGAGTGATGACACCAACAACACTACACACATGGGTGCATCTGAATCTGAGAAGGTGCATGACCATCTACATCCATTGCCTGCCATGCAACAAGAAAAAGGTGGCATGACTAACAatagtttaagtaaatattcTGCTGATGAAGGCCTGCATTCAACATTGGCACCATTTACAAATGAACATTCACAAGGGAATCCTTTCAAAGCGCCAACAAGTGCAACCAGTGAGAAGACTCCTGTTGGTGCAGCTGACTTTGTGAAAGCTGATGAACATCATGATCAAGGCAATGAAACACATCATGGACTTCCATCTGAGGAGCAAGGGCACTGGAGCATGCCTAGTAGTGAAGCAAGGACACATCCTGCTAACACACATGGTGAAACTCATGTTCCCTCTTCAAGCCAACAATCAGACCCCATGTTCGCACTTGAATCAGCACAAAACCAACAACAAGCTGATGCAACTTCTAAGAACCGTGCAGGTGCCACTACTATCCCAACAAGTGTTGAACCGCATCATACCTATTCAGTTACAGAACAAGGACATCATGGCAAGGCTAGTGGCAATATGGGAGCAGACAAGAAGTTAGGCTCATCAGTGTCATCATTTTCCCCAGCTTCTGAGTCTTCAAGTCAAGACCACATGCATAATCCTGCAAATGCTGCCCCTAAAGCACCTCAAAAACGGGGAAAGGACTTTAAGTTAGTTTCAGAATCCAGTGATGATGATATCCCAATCAGTTCTTTTCCAAGGCATGGACAACAAGCTGGTGATGGGACAGGACAACACTCATCAGTAGCTGCTGCTCCTGGCACCAGCAATGGCTCAGAAAAACAAACTCCTCCACTACAGGTAATGGAGCGTCCAGAGGATCCTACAACATCTTCCAAGTATAGTTTTCCATCACATGTGTTTGATAGacacaaatcaaaatcaaagtcAAACACCCAATGGAGCACTGCCTCTAATGAATCATTGTTCAGCATTCAAATGGGAAATATGAGTTTCTCTAGTGACATGGCTTGGATGGGTAAATCTGGTGACATGGATAAACCTGGTGACATGAACTCGTCTGGTGCATTTCCAAGCAGTCAGCCCCCACTCCCACCCCAACCCCAACCCCCAGCTACAAAATTCAGTGATATCAGCCAAAGCACTGCCAAACAACATGAAAGTTCGAGAGTGACTGAAGAAAAAGCTGCTGAGACAATGAGAGAGGTTATAATGGAAAACAGTATAAATAAACAGAATATAAGTAACGGGGATTTGACAACTGCTGGTGGGGCAACAGGTTCCAATAGGTGTTCTAGTTCTAATGCCCATTCTCACTGTTCAGATGCGAGCACCAAATCCTTTGCCTTTAACGTAATGACAGATGGAGACAAAACTCTTTCACCAAAGCATggtgaagagaagagaaagcaGCAGAAACAGCCAGAGCAGCAGAACCTTAAAGCAACACCAGATGCAGCTCAGAACCCCAAGCCAACCCCGAATACTTCTCGGAACAAATCATGGCTATCTTGCTTCTCATGCTGTTAA 1941 0.4292 MESVRNSGSSADMRTGLSTNSGEGEQFNKEKKQVPSSSPFSSELTSQDHFDFMTNATTTTTHPRPLGATSPIHDQTYLQSELHHTHSVAEKGDGRPVNSHLEAHPANPFGEAHHSPLANNTAPSSSSQNPFLLMSDDTNNTTHMGASESEKVHDHLHPLPAMQQEKGGMTNNSLSKYSADEGLHSTLAPFTNEHSQGNPFKAPTSATSEKTPVGAADFVKADEHHDQGNETHHGLPSEEQGHWSMPSSEARTHPANTHGETHVPSSSQQSDPMFALESAQNQQQADATSKNRAGATTIPTSVEPHHTYSVTEQGHHGKASGNMGADKKLGSSVSSFSPASESSSQDHMHNPANAAPKAPQKRGKDFKLVSESSDDDIPISSFPRHGQQAGDGTGQHSSVAAAPGTSNGSEKQTPPLQVMERPEDPTTSSKYSFPSHVFDRHKSKSKSNTQWSTASNESLFSIQMGNMSFSSDMAWMGKSGDMDKPGDMNSSGAFPSSQPPLPPQPQPPATKFSDISQSTAKQHESSRVTEEKAAETMREVIMENSINKQNISNGDLTTAGGATGSNRCSSSNAHSHCSDASTKSFAFNVMTDGDKTLSPKHGEEKRKQQKQPEQQNLKATPDAAQNPKPTPNTSRNKSWLSCFSCC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2026 646 MobiDBLite consensus disorder prediction 188 211 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 31 71 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 241 316 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 117 146 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 386 414 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 596 612 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 476 533 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 89 153 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g2026 646 PANTHER SMOOTHELIN-LIKE PROTEIN 1 50 646 - -
Ssu1g2026 646 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 50 646 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 590 638 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 225 456 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 613 638 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 1 71 - -
Ssu1g2026 646 MobiDBLite consensus disorder prediction 327 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2026 Ssu-Chr1 57548705 57551003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2026 - - gmx:102662633 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2026 1 57548705 57551003 Ssu1g2026 1 57548705 57551003 ECH