Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2004 ATGACTGTAGAGAAGACGAGTTTTGGTGATTTCATTGTTGTCGTTAACCAATCATCTGGCAATGAAGATCAAATTGAAGACAATCCTAAAAGAGTGCGCAAGCGGTTGTATGTTTCAAAGATTGTCAGTACATTGAAGAGAAGGGACAGTTCTTTCCGGAAAAATCTAGGGTGGGCTTTTGAGCAGCTGCCgTTTGAATTTGGAGATGAGATGACTGCAGGAATTTCCTTGGAAGAGCTGCTTGCAGCAGTGAAGGACCATGATTTTGTTGGAAAAGAAGACAAATCAAAACGTGTAAAGAGAAGCAAAACTACCTCAAAACCTGACTTAAACCATATTGGGTGTCATGACACAAAGTCATTACTGGCTGTGGACATGATTGATCATCTTAAGAAAGGAATTGGATCTGAAGGACagATTGTGCATATTGAAGACATATGTGCCAGAAAAGCGATTTACAGTGAGATCCCAATTGAACTATCAGAGAAAATGAGATCTGCACTGAAGTGTATTGGAGTTTCCAAATTTTACAGTCACCAGGCAGAGTCTATAAAAGCTTCCCTTCATGGTGAAAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCCCTTTGCTATAACTTCCAGTTCTAG 636 0.3962 MTVEKTSFGDFIVVVNQSSGNEDQIEDNPKRVRKRLYVSKIVSTLKRRDSSFRKNLGWAFEQLPFEFGDEMTAGISLEELLAAVKDHDFVGKEDKSKRVKRSKTTSKPDLNHIGCHDTKSLLAVDMIDHLKKGIGSEGQIVHIEDICARKAIYSEIPIELSEKMRSALKCIGVSKFYSHQAESIKASLHGENVVVATMTSSGKSLCYNFQF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2004 211 PANTHER ATP-DEPENDENT HELICASE HRQ1 34 209 - -
Ssu1g2004 211 PANTHER ATP-DEPENDENT HELICASE HRQ1 34 209 - -
Ssu1g2004 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 207 IPR027417 -
Ssu1g2004 211 Gene3D - 129 209 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2004 - - gmx:100819522 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2004 1 56752178 56754375 Ssu1g2004 1 56752178 56754375 ECH