Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1995 ATGGGAGATGAGGTTGACTATCCAACTAGTggtaaaaagtttaaattgggTGAAAAGGATGTTCCAATTTACATatctgatgatgatgatgatcaagCCATTGATTGTCATGTTGATGTATCAGCCTTCCCCAGTGCAACAACCACCCACCATGACGGTCCAAAGCGGCAACGACACCGCGCAGCCACACGTGCTGGTGATTCCGTTCCCAGCACAGGGCCATATGATCCCCCTCCTCGACCTAACCCACAAGCTCGCCTCCAACCCAACCTCACAATCACCCTCCTCACAACCCCAAACAACCGACCCCTCCTCTCCCCTCTCCTTTCCTCCCACCCTTCCATCCACACCCTGATCCTCCCCTTCCCCTCTCACCCTTCCCTCCCTCCCGGCATCGAAAACGTCAAAGACATGCCCCACTCCATTCGACCCATCATGCTCGCCCTCTCCAACCTCCACCACCCTCTCATCCACTGGTTCCACTCCCACCCTTCCCCTCCCAACTTCATCATCTCCGACATGTTCTGCGGCTGGACCCAACACCTCGCGTCCGAACTCGGAATTCGAAGACTCGTCTTCTCCCCTTCCGGTGCCTTCGCTTACTCCACCATGTGCCTCCTCTGGAAGCAACTGCCGAAGCGCGAAAACGACACCGACCGAAACGAGGTCGTTTCGTATCGCACGCTTCCGAACTCACCGAAATACCCCTGGTGGCAGGTGTCTCCTCTGTTCCGGAGCTACGTTGCGGGAGAGCCGGATTCGGAGAAGTTCAGGGATTGGTATCTCGGGAACTTCGCGAGCTGGGGACTCGTCGTGAACTCGTTCGACTCGTTGGAGAAGCCTTATCTCGACTTTCTCAAACGGGAGCTGGGCCACGATCGTGTGTGGGCGGTTGGACCGTTGCTCCCTGAGGACGCGAAGGAGAGAGGCGGCTCCAGTACCGTGTCCGTGAACGACGTCGTTTCGTGGCTGGATAAAATGGAGGATCGCAAGGTGGTGTACGTGTGTTTCGGGAGCCAGACCATCCTGAGTGAGGATCAGACAGAGGCGGTTGAGTCGGCGTTGGTGAAGAGTGGGGTCCACTTTATATGGTCGATAAGAGAAGCTGTTAACGGAAACCAAGACACTGTTCCATCGAGTAATGGGAACTTTGGGAATGGGAAGGGTCTCGTGATTAGAGGGTGGGCCCCGCAGGTGGTGATACTGCGGCACCGCGCGGTGGGCGCGTTCTTGACTCACTGCGGGTGGAACTCGGTGCTGGAATCGGCGGTGGCTGGGGTGCCGCTGCTTGCGTGGCCTATGACCGCGGACCAATTCGTGGACGCCACGTTGCTCGTGGAGGAGTTGAAGGTGGCGAAGAAGGTGTGCGAGGGGGAGAGAACCGTTCCCGACTCGGACCTGCTGAGTCGGGCTCTGGCTGAGTCGGTGAGTGGGAACGGCGCGGAAACGATGCGGGCGTTGAAACTGAAGGCCACGACGCTTGACGCCGTTAGAGAGGGCGGAAGCTCCCAGAAGGATTTGCGGTGCTTGATGGAACGGCTTCTTTTTCCGTCACAGTAG 1560 0.5641 MGDEVDYPTSGKKFKLGEKDVPIYISDDDDDQAIDCHVDVSAFPSATTTHHDGPKRQRHRAATRAGDSVPSTGPYDPPPRPNPQARLQPNLTITLLTTPNNRPLLSPLLSSHPSIHTLILPFPSHPSLPPGIENVKDMPHSIRPIMLALSNLHHPLIHWFHSHPSPPNFIISDMFCGWTQHLASELGIRRLVFSPSGAFAYSTMCLLWKQLPKRENDTDRNEVVSYRTLPNSPKYPWWQVSPLFRSYVAGEPDSEKFRDWYLGNFASWGLVVNSFDSLEKPYLDFLKRELGHDRVWAVGPLLPEDAKERGGSSTVSVNDVVSWLDKMEDRKVVYVCFGSQTILSEDQTEAVESALVKSGVHFIWSIREAVNGNQDTVPSSNGNFGNGKGLVIRGWAPQVVILRHRAVGAFLTHCGWNSVLESAVAGVPLLAWPMTADQFVDATLLVEELKVAKKVCEGERTVPDSDLLSRALAESVSGNGAETMRALKLKATTLDAVREGGSSQKDLRCLMERLLFPSQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1995 519 Gene3D Glycogen Phosphorylase B; 322 497 - -
Ssu1g1995 519 MobiDBLite consensus disorder prediction 44 86 - -
Ssu1g1995 519 PANTHER UDP-GLYCOSYLTRANSFERASE 89A2 90 512 - -
Ssu1g1995 519 CDD GT1_Gtf-like 90 499 IPR002213 GO:0008194
Ssu1g1995 519 ProSitePatterns UDP-glycosyltransferases signature. 395 438 IPR035595 -
Ssu1g1995 519 PANTHER GLYCOSYLTRANSFERASE 90 512 - -
Ssu1g1995 519 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 329 445 IPR002213 GO:0008194
Ssu1g1995 519 Gene3D Glycogen Phosphorylase B; 85 321 - -
Ssu1g1995 519 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1995 Ssu-Chr1 56438542 56443177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1995 91 515 Glycosyltransferase AT1G73880 54.734 4.46e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1995 - - gmx:100779428 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1995 1 56438542 56443177 Ssu1g1995 1 56438542 56443177 ECH