Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1984 atgtcttcaaAATTACGACAATCATTATCTGATAATCTGAGGGTAGTTATAGAGAACAAGAACATGGTTTTCTCTTCATTTCGAAGATACTTTAGTATGAGGCGCCAAAGCTCCAAGGTTCAGGCTTTGTATGACCACTGCAAAACCATGTTATCGCCCTCTGGAACGGCCCCTCCTTCATCCCAGGCTTTGCAGAAGCTCTCTTCAATTCTGGACACTATTCAACCTGCTGATGTTGGCCTTAAAGAGGAAACTGCAGATGATGATCGAGGGCATGGATTTTTTGGTGCTAACGTGCTTAATAGAGTAGCTCGATGGGCTCAACCAATAACATATGTGGACATTCGTGAATGTGATAGTTTTACGATGTGTATATTCTGTTTCCCAACTTCTTCGGTTATTCCACTCCATGACCATCCTGGGATGACTGTATTTAGCAAACTTCTCTATGGCTCTTTGCATGTGAAAGCATATGACTGGGTTGAGCCTCCCTGCATCGTAGAAAACAAAGGACCAGGATATGCTCAAGTAAGACTAGCAAAGTTAGCAGTTGATAAGGTCTTGAATGCACCGTGTGAGACATCAGTTTTATATCCCAAACACGGTGGAAATCTGCACTGTTTCACAGCAGTAACACCTTGTGCCATGCTAGACGTTCTCACACCCCCTTatagagaagatgaaggaaggaAGTGTACTTACTATCATGATTATCCTTATTCAGCATTCTCAGCTGGAAATGCACCTATATGTGATGGGGAAGAGGAGGAATATGCTTGGCTCGCAGAGTTAGAATCACCTAGTGATCTTTATATGCGCCAGGGGGTATATGCTGGTCCAGGTATTCAGCTTTAG 855 0.4187 MSSKLRQSLSDNLRVVIENKNMVFSSFRRYFSMRRQSSKVQALYDHCKTMLSPSGTAPPSSQALQKLSSILDTIQPADVGLKEETADDDRGHGFFGANVLNRVARWAQPITYVDIRECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIVENKGPGYAQVRLAKLAVDKVLNAPCETSVLYPKHGGNLHCFTAVTPCAMLDVLTPPYREDEGRKCTYYHDYPYSAFSAGNAPICDGEEEEYAWLAELESPSDLYMRQGVYAGPGIQL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1984 284 Gene3D Jelly Rolls 96 245 IPR014710 -
Ssu1g1984 284 Coils Coil 284 284 - -
Ssu1g1984 284 Pfam PCO_ADO 70 281 IPR012864 GO:0016702
Ssu1g1984 284 SUPERFAMILY RmlC-like cupins 37 239 IPR011051 -
Ssu1g1984 284 PANTHER 2-AMINOETHANETHIOL DIOXYGENASE 34 283 - -
Ssu1g1984 284 CDD cupin_ADO 119 224 - -
Ssu1g1984 284 PANTHER UNCHARACTERIZED 34 283 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1984 Ssu-Chr1 55708931 55712888 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1984 K23953 - gmx:100807889 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1984 1 55708931 55712888 Ssu1g1984 1 55708931 55712888 ECH