Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1983 ATGGCTTTAAGTTTGACACATCAAGCAGCCACCAAAAccccctcttcctcttcctctttcgTCGCCTCTCGCCCTCTACGGACCCCTCAGAGCCTTCCTTTCAGGAGCCCGCGGCATCCCCTCGCCGTGCGCGCGACCGCCACCGCGGCTCCTGCGGCGGCGGCGAGGGAGTGCAGGGTGAAGTCGGTGAAGGCGAGACAGATCGTGGACAGCCGGGGCAACCCGACGGTGGAGGTGGATCTGGTGACCGACCAGCTTTTCCGATCGACGGTGCCGAGCGGCGCGTCGACGGGGATTTACGAGGCTTTGGAGCTGAGGGACGGGGACAAGAGCGTTTACGGCGGGAAAGGTGTTCTTAACGCCGTTAGGAACATCAACGAGGTCTTGGCTCCGAAACTTGTTGGCGTTGACGTTAGGAATCAAGCTGATGTGGATGCTATTATGCTGGAAATTGATGGAACTCCTAACAAATCAAAACTAGGAGCTAATGCAATATTGGGAGTTTCGTTGAGCGTATGTAGAGCTGGTGCAGGAGCAAAGGGAGTGCCCTTGTACAAACACATCCAGGAGATTTCAGGAACAAAGGAACTTGTTATGCCGGTTCCagcttttaatgttataaatggGGGCAGTCATGCTGGAAATAATCTGGCTATGCAAGAATTTATGATACTACCAGTTGGAGCAACTTCATTTGCTGAGGCGCTCCGCATGGGCAGTGAAGTTTATCATGTATTAAGGGGCATAATCAAGGCAAAATATGGACAAGATGCATGTAATGTTGGAGATGAAGGAGGATTTGCTCCCAATGTCCAGGATAACAGGGAGGGGTTGGTTTTACTCATGGATGCCATTGAGAAGGCTGGTTATACTGGCAAGATTAAAATAGGTATGGATGTTGCAGCTTCGGAGTTTTACACTAAGGATGGGAAGTATGATTTAAACTTCAAGAAACAGCCAAATGATGGAACTCATGTTCACTCTGCTCAGAGTCTTGGTCAACTTTATAAACACTTTGTGAAAGAATTTCCCATTGTGTCAATTGAGGATCCTTTTGATCAAGATGATTGGGGTTCATGGACTTCACTGCTCTCTGCTGTTGATATTCAACTTGTAGGAGAtgatttgttagttacaaatCCTAAGAGAATAGCTGAGGCCGTCCAGAAGAAGGCTTGCAATGGTTTGCTTCTAAAGGTTAACCAGATTGGTACAGTAACTGAATCTATTCAGGCTGCACTTGACTCAAAGGCTGCAGGCTGGGGTGTCATGGTTAGTCATCGGAGTGGTGAGACTGAGGATAACTTCATTGCTGATCTCTCTGTTGGCTTGGCCAGTGGACAGATAAAGACTGGTGCTCCTTGCCGAAGTGAGCGATTGGCAAAGTATAATCAGGTAATTGGAATCTTGTGTTCCTCTTCCTTGATTCAAGGTTTTCGCTCAGCCTATGACATggctattttaaaataa 1470 0.4612 MALSLTHQAATKTPSSSSSFVASRPLRTPQSLPFRSPRHPLAVRATATAAPAAAARECRVKSVKARQIVDSRGNPTVEVDLVTDQLFRSTVPSGASTGIYEALELRDGDKSVYGGKGVLNAVRNINEVLAPKLVGVDVRNQADVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLYKHIQEISGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHVLRGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIEKAGYTGKIKIGMDVAASEFYTKDGKYDLNFKKQPNDGTHVHSAQSLGQLYKHFVKEFPIVSIEDPFDQDDWGSWTSLLSAVDIQLVGDDLLVTNPKRIAEAVQKKACNGLLLKVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQVIGILCSSSLIQGFRSAYDMAILK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1983 489 CDD enolase 62 469 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 SUPERFAMILY Enolase N-terminal domain-like 60 191 IPR029017 -
Ssu1g1983 489 MobiDBLite consensus disorder prediction 1 30 - -
Ssu1g1983 489 SFLD enolase 61 469 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 PANTHER ENOLASE 35 469 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 MobiDBLite consensus disorder prediction 1 37 - -
Ssu1g1983 489 SMART Enolase_N_3 60 188 IPR020811 -
Ssu1g1983 489 SFLD enolase 61 469 - -
Ssu1g1983 489 Gene3D - 182 478 IPR036849 -
Ssu1g1983 489 PRINTS Enolase signature 373 384 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 PRINTS Enolase signature 161 177 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 PRINTS Enolase signature 91 105 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 PRINTS Enolase signature 218 231 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 PRINTS Enolase signature 425 442 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 PRINTS Enolase signature 396 410 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 Pfam Enolase, C-terminal TIM barrel domain 197 469 IPR020810 -
Ssu1g1983 489 SUPERFAMILY Enolase C-terminal domain-like 196 469 IPR036849 -
Ssu1g1983 489 ProSitePatterns Enolase signature. 396 409 IPR020809 -
Ssu1g1983 489 SMART Enolase_C_3 196 481 IPR020810 -
Ssu1g1983 489 TIGRFAM eno: phosphopyruvate hydratase 61 469 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 Hamap Enolase [eno]. 58 473 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Ssu1g1983 489 Gene3D - 54 181 IPR029017 -
Ssu1g1983 489 Pfam Enolase, N-terminal domain 60 188 IPR020811 -
Ssu1g1983 489 PANTHER ENOLASE 1, CHLOROPLASTIC 35 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1983 Ssu-Chr1 55703739 55706935 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1983 K01689 - gmx:100787451 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1983 1 55703739 55706935 Ssu1g1983 1 55703739 55706935 ECH