Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1969 ATGGATGTGAAGAAAATTGTGGTGGTTGTAGAAGATGTGGATGCAGCAAGAACTGCTCTACAATGGGCTCTTAGAAACGTCATTCGCTATGGTGACATAATCACCCTTCTCCATGTCTACCACTCCACAAGATCAAGAAGCAGAACCAAAGCTCGTCTTCTTCGCCTCAATGGCTTCAAATTAGCCCTTTCCTTTCAAGACATCTGCAACAACTACCCCAACACAAAGGTTGAAATTATTGTCACGGAAGGGGACCAAGAAGGAACCAAGATCGCTGCCACGGTGCGAGAGATTGGAGCTTCCATGCTTGTGGTTGGACTCCATGATTGTAGTTTTCTATACAAATTGGCAATGGCCCATAACAGCTTAGCCAGCATTTTCAACTGCAGAGTACTTGCCATCACGCAGCCTCATGCGTCACCAGCGAGGCCCATGATATCTGCAATATCTGTGCTAGACAGCTCAACCAACATGGATTTTTCACAGATTGATCTTTCTAGATTACAAGTCCCTCCTACCCCTCCACCCAAAATTCCATACCGAATCTGTCCTAACCCGTCTGCAATTATTTGGAGATCAAGGAAGTCAAGGAGAAGGTGA 600 0.4567 MDVKKIVVVVEDVDAARTALQWALRNVIRYGDIITLLHVYHSTRSRSRTKARLLRLNGFKLALSFQDICNNYPNTKVEIIVTEGDQEGTKIAATVREIGASMLVVGLHDCSFLYKLAMAHNSLASIFNCRVLAITQPHASPARPMISAISVLDSSTNMDFSQIDLSRLQVPPTPPPKIPYRICPNPSAIIWRSRKSRRR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1969 199 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 199 - -
Ssu1g1969 199 Pfam Universal stress protein family 4 118 IPR006016 -
Ssu1g1969 199 Gene3D HUPs 2 139 IPR014729 -
Ssu1g1969 199 CDD USP_Like 15 106 - -
Ssu1g1969 199 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1969 Ssu-Chr1 55370407 55372295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1969 - - vra:106755935 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1969 1 55370407 55372295 Ssu1g1969 1 55370407 55372295 ECH