Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1967 ATGTCAAAAAAGCAGCTAGATATCgcaaagaaaatgataaatgagaTGCAAAGGAAGAAGGATGTCAATGGAAGTCCTGGCAGGGAGCAGGTATCGATGCTCCAACAGCAAGTAACTGAATTTCGGAAGTATAGTAGTTCTGGTAGAAATGCTATGGCAAATAAGAAACTTAAAGATGTTCAAGACATGGAGTTAGAAGTTTTGGAACTGAACAGGAGAAACAAAGAGCTTGAATTGGAAAAAAGGGAGTGGGAATTAAGTTGGCTGCTGCCCAAGCAAGAATCAGAACAAAGGAGGAAATAG 303 0.3762 MSKKQLDIAKKMINEMQRKKDVNGSPGREQVSMLQQQVTEFRKYSSSGRNAMANKKLKDVQDMELEVLELNRRNKELELEKREWELSWLLPKQESEQRRK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1967 100 Coils Coil 53 87 - -
Ssu1g1967 100 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 83 IPR040265 -
Ssu1g1967 100 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1967 Ssu-Chr1 55358576 55359340 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1967 - K11320 gmx:100795382 103.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1967 1 55358576 55359340 Ssu1g1967 1 55358576 55359340 ECH