Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1959 ATGGTGGGGGGAGGGAGCAGGAGGGAGGAGGCAGTGTCGATGAACAGCACCAACATTTTCGCAGCGCTGGgaagcttaaagaagaaaaagagcaaGAACAAGGACGAAGCCTCTTCCAACACCAGAGGCTCCCAAGAGCCCGAGAAAAAGGACGTTTTCTGGGCCCCGACTCCTCTCACAGCGAAGTCGTGGGCCGATGTCGAGGATGAAGACGACGAAGATTACTACGCCACCACTGCTCCTCCTGATTCCGCTTGGCCCAAAGCCAATGAAAGTGATGCTGCCGTAGAGGAAAGTGAGAGTGATGAAGAAGGTCTTGATGATGTGGAagatgatgctgaggacaaACATGAAAATGACTTGGAGGTTCCAGTAGATACTAAACCTGTTCTTGAGAAGCCTGCTCAACCATCATTAGATACCAAAGAAACTGAAAGACAACTTTCTAAAAAGGAATTGAAGAAGAAAGGGCTTGAAGAGCTTGAAGCTGTTTTGGCTGAGCTAGGGTATACTCAAAGAGAACCCAGTGGACATGATGATTCCCATGGTCTGGGGAAGAAAGAATATGATCAAAATGGTGCAGTGCTAAAGGAGAATGTTTCTGGGGAAAGCAAAAGtgcaagaaagaagaaaaagaaggataaaTCTTCAAAGGAGCAGAAAGAATCTCAAGACCAGCCTGATGGCATGGATGTTGGAAGTATGACTTCTGAAACTGCTGGCATAGAGAAGGCAGAGGATGTGTCTGCCATTGATGTTAAAGAACGGCTTAAGAACGTCACTtctatgaagaagaaaaaatcaagTAAGGAGATGGATGCTGCTGCACGAGCAGCTGCTAGTGAGGCTGCAGCAAGGAGTGCAAAGCTTGCTGCAgccaagaaaaaagagaaggcaCACTACAATCAGCAACCAGTACGGTAA 924 0.4242 MVGGGSRREEAVSMNSTNIFAALGSLKKKKSKNKDEASSNTRGSQEPEKKDVFWAPTPLTAKSWADVEDEDDEDYYATTAPPDSAWPKANESDAAVEESESDEEGLDDVEDDAEDKHENDLEVPVDTKPVLEKPAQPSLDTKETERQLSKKELKKKGLEELEAVLAELGYTQREPSGHDDSHGLGKKEYDQNGAVLKENVSGESKSARKKKKKDKSSKEQKESQDQPDGMDVGSMTSETAGIEKAEDVSAIDVKERLKNVTSMKKKKSSKEMDAAARAAASEAAARSAKLAAAKKKEKAHYNQQPVR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1959 307 MobiDBLite consensus disorder prediction 138 155 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 173 193 - -
Ssu1g1959 307 PANTHER DNA TOPOISOMERASE 2-ALPHA-LIKE 1 307 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 28 49 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 245 273 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 23 155 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 96 117 - -
Ssu1g1959 307 PANTHER EXPRESSED PROTEIN 1 307 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 167 307 - -
Ssu1g1959 307 MobiDBLite consensus disorder prediction 289 307 - -
Ssu1g1959 307 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1959 Ssu-Chr1 54868927 54872783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1959 - - gmx:100813817 303.908