Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1950 ATGCATGTCATTTGGGCTCAAGATTTTTTTCTGGTTCCTCAGGCTCTCGAGAAGTCTGTGTGGCAAAGCAAAGTTAAGCCTTTGAGGAAAATGTACTATGTTGGACTCACATTGCTAAGGCTAATTCTCTTTTCCTATGACTACAACAGAGACCCTATTCTAGCTCCATACTCAGATAATGGTGATTTCAACAGAATGAGCTcaaatttcttttccatttatgGTATCAATGGTACGGCAGTTCCCATCATCATGGTTTTAATTGCAACTGTTGTCCACATTCAACAAAGCTGCAACATTCAAAAATCATTCTGTCGCTAA 321 0.3738 MHVIWAQDFFLVPQALEKSVWQSKVKPLRKMYYVGLTLLRLILFSYDYNRDPILAPYSDNGDFNRMSSNFFSIYGINGTAVPIIMVLIATVVHIQQSCNIQKSFCR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1950 106 PANTHER - 2 103 - -
Ssu1g1950 106 Pfam Protein of unknown function (DUF2921) 6 101 IPR021319 -
Ssu1g1950 106 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 2 103 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1950 Ssu-Chr1 54637846 54638166 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1950 - - pvu:PHAVU_009G199800g 183.341