Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1944 ATGGACGACCACCGAAATTCAACCCCCAAAAACGCCATTGGCCTCTGTCTCCTCCCACAGGAACTCATCCAAAACATCTTCCTCTCCCTAGTGCTGCCCGAAATCATTCGCTTAAAACTCGTCAACAAATCCTTCTCCCGAATCATCTCCGACCACACCTTCGTTCGCCAGTGCAACAATTTATCCACTTCCACCACGTGGCTCTTCGTCTACAAAAAACGCTGGCTCCGCGACGCCGTGCTCCACGCCTTCACCGATCGGAGCTCCGATCGCTGGTTCCGGATCCCCATCGCGGAGCTTCTGAAACCCGTACACTTTCACGGCGAGGATCTCTACTTCCTCGCCGCTTCGAATAACGTCTTCCTCTTCGCCTCCAACACCGTTCGCGAGGTTGTCGCCGTTAACTTAGTCGCCGTCGCCGTTAAGAAGATCCCCCCTTCTCCCTTGGGTCCACGTGGCACCTCCTCGTGGAGACGATCCGGAATGAAGCTCGTTACTGACCCGTCCGGGTCGGGTCACTTTCGCTTCATGTTCGCGGAGTTCGTGGGGAACCGCCCCGTTTTGTTTGTGTACGACTCCGAGACTGACACGTGGAAGTCAACGGGGGCGGAAGAAAACGAGGCCAGTGGATTGTCGCCACGTGGCGGGGGTTACTTTTTTCTCAACGTGGTTCACGGGCCGAGAGAGAGCGTCTTGGTTGCGTCAACACCCGAGTGTGACGAGCCCGTGGTTCTACGGCCGAGATTTGACGACGCGAGGGGGGGTGGGggtaatttaacggttggattcaGCTGGGGGAACGTGATTGATCGGTTACACGTGTACGGTGACGGGTACATGATGATCGTGAAATCGGAGGGTGTGAGGGTAACTGGGGAGAGTGGGGTCACGAGGAGCGTGAGGGTGTTGAAGGGTGTGGAACTATGGGGTTTGAGCTTGGACGGAAGGAACTGGGAGTTTGTGTCTATGGTTCCTGGTGTGATTGAGAAGCCTTATGCGGCAATGATGGGGTGCTTAGAGGAGAAAAATGGGATCGTCAGGGCTGCGTTGGTGTCTAATTGTGAGGGAGTTTGGGACATGACGTGGCTCTCCTTTGATACCAAATGGAACCGGTGGACATGGACGCCCCTCCCTGATTGCAAAATGAAGGGTTGGAACATGGCTGGAATAAGCTTCTCCTCTGGACTTACCTTGCCATGA 1200 0.545 MDDHRNSTPKNAIGLCLLPQELIQNIFLSLVLPEIIRLKLVNKSFSRIISDHTFVRQCNNLSTSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPIAELLKPVHFHGEDLYFLAASNNVFLFASNTVREVVAVNLVAVAVKKIPPSPLGPRGTSSWRRSGMKLVTDPSGSGHFRFMFAEFVGNRPVLFVYDSETDTWKSTGAEENEASGLSPRGGGYFFLNVVHGPRESVLVASTPECDEPVVLRPRFDDARGGGGNLTVGFSWGNVIDRLHVYGDGYMMIVKSEGVRVTGESGVTRSVRVLKGVELWGLSLDGRNWEFVSMVPGVIEKPYAAMMGCLEEKNGIVRAALVSNCEGVWDMTWLSFDTKWNRWTWTPLPDCKMKGWNMAGISFSSGLTLP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1944 399 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Ssu1g1944 399 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR FAMILY PROTEIN 1 398 - -
Ssu1g1944 399 PANTHER F-BOX/KELCH-REPEAT PROTEIN 1 398 - -
Ssu1g1944 399 Pfam F-box domain 17 54 IPR001810 GO:0005515
Ssu1g1944 399 SUPERFAMILY F-box domain 15 71 IPR036047 GO:0005515
Ssu1g1944 399 SMART fbox_2 18 58 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1944 - - gmx:100805433 694.501