Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1900 ATGTGTTCGATTAGGGTCGCCACCGAGGCTCACTCTCCCGCTACCAAGAACAACAAGGAGTGGCAAGAAAAGCTTCCCGTGGTTGTCCTCAGAGCAGAAGAAATCATCTACTCCAAAGCCAATTCCGAGGCAGAGTACCTGAATCCTGACACGCTCTTGGACCGCCTCAACGATGCCATCAACACTATTATACGCAGAAATGAAACCACTGAGACCGGTGAGCTTTTGCCTCCATGTGTCGAAGctGCACTTAACCTTGGTTGCAAGGCAGTGAGAACATCAAGAAGTGATAGGCATAATAACCCCAGGACTTACCTTGCCTCTAGGAATCAACAACATCCTTGTTCTGTTTCTCCCAAAACTGTTGTGATCAATGCTTTAAAGTTTCTTCCAGTGTTTGATTCTAACCAGCACACCAACCAAAATAACTACCCCTTATTAGACACTTTTGCTTCTGTTCACCATCACCAACCCTTGGCAGTGGAAACTAACCCCTCATTGAACTTGGGTTCAGTTTACCCGCTATATTATGGTTTTGAAACCAAAGAGACTGAACTAAGGACTAGCAACCAAGGAAACACTTGTTTTGACACAATCTTTGTTGGCAGACCGGTTGTAGCCTTGGAGCCATCTAGAATGGATCTATTAGAAAACTTGTCCTGTGGTAGAGTCCATCATGTTCCAAACAGAATTGTGAAAGAAAATGCTGTAAGTGTTGTGGAGGAGTCGCAAGATCGGGACTGTGATTTGGCTTTGAGGTTGGGTATATGTTTGCAGAGCAGCAAAACAAGTTCAGCAAATGAATTACAAGATGTTGAGTTGAGAGTTTCTCAGGAGTGCAGGAAATTTGGCTATTCATCTCAACAGAAAAATGAAGGGTACTGTTTTTACCCTAGAGGGGCAGGTTATGGTGCCATTTAA 921 0.4397 MCSIRVATEAHSPATKNNKEWQEKLPVVVLRAEEIIYSKANSEAEYLNPDTLLDRLNDAINTIIRRNETTETGELLPPCVEAALNLGCKAVRTSRSDRHNNPRTYLASRNQQHPCSVSPKTVVINALKFLPVFDSNQHTNQNNYPLLDTFASVHHHQPLAVETNPSLNLGSVYPLYYGFETKETELRTSNQGNTCFDTIFVGRPVVALEPSRMDLLENLSCGRVHHVPNRIVKENAVSVVEESQDRDCDLALRLGICLQSSKTSSANELQDVELRVSQECRKFGYSSQQKNEGYCFYPRGAGYGAI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1900 306 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 135 300 - -
Ssu1g1900 306 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 135 300 - -
Ssu1g1900 306 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 5 122 - -
Ssu1g1900 306 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 5 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1900 Ssu-Chr1 51781718 51782844 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1900 - - gmx:100798900 452.981