Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1870 ATGGTTCAGCTGATGAAGAATTCCGGGAAGCCCGAAACGGCGTCGTGCGGCGACACCAAGAACCTCGTGAAGTTGGAGATCGTCGAGGACCCACTGGAAGAAGAGCATGGCCCCCTCAACAAGCGCTGCAAACCCTCTCCCTCTCACCCTCAGCAATGGAGTGCTTCGAATGATGCTTCCGTCAGTTCTCCTTCCCATCTGAATATACTCGACGAGCCGAGCCCTTTGGGTTTGCGCCTGAGGAAGAGCCCTTCGCTGTTGGATTTGATTCAGATGAAACTTTCTCAAGGAAGTGCGcagcaaaatgaaaaattaagctCTGGAGTGAAAAGGGAGAGCAGAGGTGCTGCTGCTGCTGCCTCCGGTACCACTGACAAGCTTAAAGCTTCAAACTTCCCTGCTTCGCTTCTGAGGATTGGTTTGTGGGAGTATAAATCAAGATATGAGGGCGACTTGGTGGCGAAGTGTTACTTTGCTAAACATAAGCTTGTTTGGGAAGTTCTTGAAGGTGGTCTAAAGAGTAAAATAGAAATTCAATGGTCAGATATCATGGCACTTAAGGCACATTGTCCTGATAATGGGCCTAGCACATTGACTGTTGTGCTTGCTAGACAGCCTCTTTACTTCAGGGAGACTAATCCTCAGCCTAGAAAGCATACACTATGGCAGGCAACAGCAGATTTTACTGATGGACAGTCTAGCGAACATAGGCTGCATTTTTTGCAATGCTCACAAGGGCTGTTGACCAAACATTTTGAAAAGCTTATCCAGTGTGACATGCGTCTTAATTTCTTAAGCCAACAGCCAGAGATAATTTTGGATTCGCCACATTTTGACTCACAACCTTCTGCTTTTGAGGACCCAGACAATCCAAAAGATCGTGAACTGCTTCAAGTCAGTGGTAAAGGATCCTCCACATCTTGTTTTCAAGACAGAGAATCACCTCAAACATCCCTGTCATCATCATTTAAGATTGAACACAACGATCCTCCTGGAATGACGTTGGATAATCTACCCCGAGATGCACCTTCACCCAGTTCAGTCATGGACTGTACTTCAATTGAAGGGAGTACAAGCTCTGAAACTGATTCCAAGGGCCCAAGAAATGGGGATCAGATAAAACTTCCTGGACTTCGACCTTCAATGTTAGTGAGTGATTTTATTGGCCAAATTGAACTTTGCCTGTCAGAGCAAATAACCTCTGGGAATCCACCCTTCTCTGATGGAGGATCGGAGTACAAGGAGATCCTAGAAGACATTGCACAGCATCTTCTTAATGACAATCAGGTTGCAGCAACTTCTGATGAAAAATCACTCATGTCGAGGAAGGACCCTGTAACAGTGCAGAATTCTCGTTTTACTGAAGATAGCACTGTTGAAGTACCTGATGATGGAAAAGATGTCAAGCCTGCTGAGGAGGAAAGAAATATTATGAATTCGCTTCGGATGTGggttgatttaaaattttacttcaacTCAACTTCATCTTTCAAAATCCGAGTACATCAGGTTGGGTTTAACGTGGGGGATGGAAAATATTGGCGTCAACTTAATTATCTAATTGACGAATGGGTTAGTCTGGTTCTGAAGATTACTCAACACGGTGAATATTTTGTGTTGATTAATGATGGAGCAGCCAAACTCTCGACCTTACAAATACTCAGTCGTTTCAAAGAGAAAATTCACAagctaattaaaaatgtatag 1707 0.4306 MVQLMKNSGKPETASCGDTKNLVKLEIVEDPLEEEHGPLNKRCKPSPSHPQQWSASNDASVSSPSHLNILDEPSPLGLRLRKSPSLLDLIQMKLSQGSAQQNEKLSSGVKRESRGAAAAASGTTDKLKASNFPASLLRIGLWEYKSRYEGDLVAKCYFAKHKLVWEVLEGGLKSKIEIQWSDIMALKAHCPDNGPSTLTVVLARQPLYFRETNPQPRKHTLWQATADFTDGQSSEHRLHFLQCSQGLLTKHFEKLIQCDMRLNFLSQQPEIILDSPHFDSQPSAFEDPDNPKDRELLQVSGKGSSTSCFQDRESPQTSLSSSFKIEHNDPPGMTLDNLPRDAPSPSSVMDCTSIEGSTSSETDSKGPRNGDQIKLPGLRPSMLVSDFIGQIELCLSEQITSGNPPFSDGGSEYKEILEDIAQHLLNDNQVAATSDEKSLMSRKDPVTVQNSRFTEDSTVEVPDDGKDVKPAEEERNIMNSLRMWVDLKFYFNSTSSFKIRVHQVGFNVGDGKYWRQLNYLIDEWVSLVLKITQHGEYFVLINDGAAKLSTLQILSRFKEKIHKLIKNV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1870 568 MobiDBLite consensus disorder prediction 346 366 - -
Ssu1g1870 568 PANTHER OS02G0793800 PROTEIN 1 446 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 275 377 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 45 69 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 299 327 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 23 42 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 1 15 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 1 74 - -
Ssu1g1870 568 PANTHER ATP-DEPENDENT DNA HELICASE 1 446 - -
Ssu1g1870 568 MobiDBLite consensus disorder prediction 98 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1870 Ssu-Chr1 48750462 48755450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1870 - - gmx:100792008 830.091