Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1848 ATGGTGGCGACGAACGTGAAGGCAGAAACCATGTCTCTGATGGATAAGCGTAGCGCGTTGGAGGCTGAGATGAACGCCATCATCACTCGCCTCTCTCAGCCCGGCGCCCCTGGCCACTCCGGCAATCTCCTCGACTCCGAgGGCTTTCCTCGTTCCGATATCGACATCCCCGTCGTTCGAGCCGAACGACGCCGTCTTGCAGAGTTGCGGAATGATCACAATGAGATAACtgagaaaataaaccaaaatatacaaattctGCATTCCGCAAGACTTGGAAACAGGTCATCGCCCTTCAAGAATTCAGGTAATGATGATGGTTCAGATACTCAGACCTCATCAACTATAGACACTGTTGCATCAATGCCATCACAAATTGTCCTTTTGAGACATTCCCCCAACTCAATGGATGTGGATGTGTTGGTTAGCAGACCCTTTGCAATGGTAGACGAGATAGCAGATGCATCACCAGCAGTGGAGGATGGTTTACAACTTGgtgatcaaattttgaaatttggcAATGTGGAAGCAGGTGATAATTTGCTCCAAAGGCTTTCTTCTGAGGCTCAGTCAAATGTGGGTTGTGCAGTACCAGTTGTTATCATGAGGCAAGGCACAGTGATCAACTTAACTGTTACACCTAGAACTTGGCAAGGCAGAGGACTACTGGGGTATGCCTGCTTTCtctatcattttgttttttgttgttaG 711 0.4444 MVATNVKAETMSLMDKRSALEAEMNAIITRLSQPGAPGHSGNLLDSEGFPRSDIDIPVVRAERRRLAELRNDHNEITEKINQNIQILHSARLGNRSSPFKNSGNDDGSDTQTSSTIDTVASMPSQIVLLRHSPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQSNVGCAVPVVIMRQGTVINLTVTPRTWQGRGLLGYACFLYHFVFCC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1848 236 Coils Coil 59 79 - -
Ssu1g1848 236 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 1 225 IPR035269 GO:0070682
Ssu1g1848 236 MobiDBLite consensus disorder prediction 93 117 - -
Ssu1g1848 236 Pfam Nas2 N_terminal domain 12 89 IPR040815 -
Ssu1g1848 236 Gene3D - 2 96 - -
Ssu1g1848 236 Gene3D - 130 227 IPR036034 GO:0005515
Ssu1g1848 236 SUPERFAMILY PDZ domain-like 142 219 IPR036034 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1848 K06693 - gmx:100803329 390.963