Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1844 ATGACGTCTCTGCCACTTCTTCAAACTGTAGAAAGTATGGAGGCAGAACCATCAATTCCCTCAGATTCACTCTGGGCTCAGATTTCCAAATTTACTATCATGGTCACTGAAGCATACAAAAGAAAGCCAATCCATTATTGGATTCTTCTTGTGCTCAGCATCATGGCAATGCTTGTGGCATTTCCTGCTTCAAGCATTCTGTCTCGTGTTTATTATGCTAATGGTGGCCAGAGCAAGTGGATTATATCTTGGGTGGCTGTTGCTGGATGGCCTCTAATTGCCATAATATTGCTTCCTgcatattttattagtaaaacCTTTCCTACTCCTCTGAACTTAAAACTGAGTCTATCTTATATCATTTTGGGTTTCCTAAGTGCTGCTGACAACCTCATGTATGCTTATGCCTATGCTTACCTCCCTGCATCTACTGCCTCACTTGTGGCATCATCATCCCTTGTGTTTTCTGCACTTTTTGGATACTTTCTTGTGAAGAACAAAGTGAATGCTTCAATAATAAATGCTGTCTTTGTCATAACTGCTGGATTGACCATCATTGCCCTGGACTCAAGTTCAGACAGATATGGTAACATTAGTGACAGTGAGTACATCATGGGATTTGTATGGGATGTTTTGGGATCTGCTCTTCATGGGCTTATTTTTGCTCTCTCAGAGCTGGTCTTTGTGAGGTTGCTGGGAAGAAGATCCTTCATTGTTGTTTTGGAACAGCAAATCATGGTTTCTCTATTTGCATTTCTGTTTACAACTGTAGGGGTAATTGTGAGTGGTGATTTTCAAGGAATGGCACATGAGGCTTCCACTTTCAAAGGTGGTAGAGCTGCTTATTATCTTCTTGTTATTTGGGGTGCAATCACTTTTCAGTTGGGGGTTCTAGGGGGCACTGCTGTAATTTTCTTAGGTTCTACTGTGCTAGCAGGTGTACTTAACGCAATAAGAACACCCATAACAAGCATTGCAGCTGTTATACTGTTAAATGACCCAATGAGTGGTTTCAAAATCCTCTCCCTAGTGATCACCTTTTGGGGACTTGGCTCATATATTTATGGTAGTTCTATGggtgaaaaatcatcataa 1095 0.4009 MTSLPLLQTVESMEAEPSIPSDSLWAQISKFTIMVTEAYKRKPIHYWILLVLSIMAMLVAFPASSILSRVYYANGGQSKWIISWVAVAGWPLIAIILLPAYFISKTFPTPLNLKLSLSYIILGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNKVNASIINAVFVITAGLTIIALDSSSDRYGNISDSEYIMGFVWDVLGSALHGLIFALSELVFVRLLGRRSFIVVLEQQIMVSLFAFLFTTVGVIVSGDFQGMAHEASTFKGGRAAYYLLVIWGAITFQLGVLGGTAVIFLGSTVLAGVLNAIRTPITSIAAVILLNDPMSGFKILSLVITFWGLGSYIYGSSMGEKSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1844 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 94 191 - -
Ssu1g1844 364 Pfam Purine nucleobase transmembrane transport 48 362 - -
Ssu1g1844 364 PANTHER OS09G0467300 PROTEIN-RELATED 15 363 IPR030182 GO:0015211|GO:0016021
Ssu1g1844 364 PANTHER PURINE PERMEASE 5-RELATED 15 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1844 28 349 Organic Solute Cotransporters AT2G24220 70.807 1.23e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1844 - - gmx:100790781 622.083