Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g1822 | ATGTCACGGGGGAGATCTGATTCGGGAGGGTGGCTGAGGGGGTGTTTGGTGGTGTTCGCAGTAGTGTCAGCGTTGGTAGTGTGTGGGCCTGCTCTCTACTGGCGATTCAAGAACGCCATCGCCGTACGCAATTCCCACAACAAACTCTCTTGCCCTCCCTGCCTCTGTGACTGCCCTCCCCCTCTCTCCCTCTTCCAACTCGCTCCTGGGTTGGCCAATCTCTCGGTCTCAGATTGCGGAAGTAATGACCCAGATCTGAAGGAGGAGATGGAGAAGCAGTTTGTGGACCTTCTCAGCGAGGAGCTGAAGTTGCAAGAGTCTGTTATTGAAGCAAACACTCGGCACATGAACATAACTTTGGCTGAGGCAAAAAGGGTGGCATCTCAGTACCAGAGAGAGGCAGACAAATGTATTGCTGCAACTGAAACATGTGAGCAGGCAAGAGAAAGAGCCGAGGCCATACTCATCAAGGAGAGAAAGGTGACTTTGGTATGGGAGCGACGAGCTCGTCAAATGGGCTGGGAAGGAGAATAA | 534 | 0.5281 | MSRGRSDSGGWLRGCLVVFAVVSALVVCGPALYWRFKNAIAVRNSHNKLSCPPCLCDCPPPLSLFQLAPGLANLSVSDCGSNDPDLKEEMEKQFVDLLSEELKLQESVIEANTRHMNITLAEAKRVASQYQREADKCIAATETCEQARERAEAILIKERKVTLVWERRARQMGWEGE | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g1822 | 177 | PANTHER | EXPRESSED PROTEIN | 6 | 176 | - | - | |
| Ssu1g1822 | 177 | Pfam | Protein of unknown function (DUF1068) | 12 | 175 | IPR010471 | - | |
| Ssu1g1822 | 177 | PANTHER | EXPRESSED PROTEIN-RELATED | 6 | 176 | - | - | |
| Ssu1g1822 | 177 | Coils | Coil | 120 | 140 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu1g1822 | Ssu-Chr1 | 45610445 | 45612928 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g1822 | - | - | gmx:100527407 | 322.398 |