Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1815 ATGTCTTCATCAAAAGTCCCTCATGTGGCTCTCCAATCCTCCTCCAACCATCGAAACATGCCTGTGATTGGACTTGGCACTGCTTCAGCGTCTTCCACCGATGTCACCAAAGTGGCagtcatggttctaaattgcggttgcggtcgctGTTGCGGTTTCATTGAAATCCCTAATATTGCGGGAAATTGCGGGAAAATGCGGttgatgcggccgcaattgcggtcgcgatgcggttgcgAAAACACTTCAGAAAATGCGGTTAATGCGGCAGCAATTGCAGTCGTGATACGGTCTCTGGAGTTGGAATATTTGGATCTTTATTTGATCCACTGGCCCATTGCTGTGAAGCCTGGAGATTGGAAACTTCCTTATCCTGAAGAGGCCCTAACGTCATTTGACTTAAAGGGTGTGTGGAAAGCAATGGAGGAATGCCAAAAGCTAGGCCTTACAAAATGCATTGGAGTCAGCAATTTCAGTTGcaaaaaacttgaaaatttgcTCTCTTTTGCTACTATTCCTCCTTCTGTCAATCAAGTAGAGATGAATCCTACTTGGCAACAAAAGAAGTTGAGAGAATATTGCCAAGCAAAAGGTATAATCATAACTGCATACTCTCCTTTGGGAGCAGCGGGGACCATGTGGGGTTCCAATAATGTTGTGGACAATGAATTGCTCAAGGAAATTGCAGAGGCTCATGGCAAATCTTTTGCTCAGGTATCTCTTAGATGGTTGTATGAGTTAGGGGTTACTGTTGCAGTTAAGAGCTACAACAAGGAGAGAATGAagcaaaatttggaaatatttgATTGGTCACTTACAAAAGATGACTATGAAAAGATTGATCAGCAAAACATGTCTTCATCAATAGTCCCTCATGTGGTGCTCCAATCCTCCTCCAACCATCGCAACATGCCTGTGATTGGACTTGGCACTGCTTCAGCGTCTTCCACCGATGTCACCAAAGTGGCAGTGTTAGAGGCTATCAAACTTGGTTACAGGCACTTTGATACTGCTTCAAAGTATGGGTCAGAGCAGCCCCTTGGAgaagccatagctgaagcactTCAACTTGGCCTCATAGGCTCTAGAGATGAACTTTTCATCACTTCCAAGCTTTGGTGCACCGATAATTTTCCTCATCTTGTTCTTCCTGCTCTCCAGAAAACACTTCAGTCTCTGAAGTTGGAATATTTGGATCTTTATTTGATCCACTGGCCCATTGCTGTGAAGCCTGGAGATTGGAAACTTCTTTATCCTGAAGAGGCCCTAACGTCATTTGACTTAAAGGGTGTGTGGAAAGCAATGGAGGAATGCCAAAAGCTAGGCCTTACAAAATGCATTGGAGTCAGCAATTTCAGTTGcaaaaaacttgaaaatttgcTCTCTTTTGCTACTATTCCTCCTTCTGTCAATCAAGTAGAGATGAATCCTACTTGGCAACAAAAGAAGTTGAGAGAATACTGCCAAGCAAAAGGTATAATCATAACTGCATACTCTCCTTTGGGAGCAGCAGGGACCATGTGGGGTTCCAATAATGTTGTGGACAATGAATTGCTCAAGGAAATTGCAGAGGCTCATGGCAAATCTTTTGCTCAGGTATCTCTTAGATGGTTGTATGAGTTAGGGGTTACTGTTGCAGTTAAGAGCTACAACAAGGAGAGAATGAagcaaaatttggaaatatttgATTGGTCACTTACAAAAGATGACTATGAAAAGATTGATCAGGTTAAGCAGCATCAGTCGACCAAGAATGGACCAGCAAAATTCATTGCTGACCTTTGGGATGGAGAAAACTAA 1800 0.3922 MSSSKVPHVALQSSSNHRNMPVIGLGTASASSTDVTKVAVMVLNCGCGRCCGFIEIPNIAGNCGKMRLMRPQLRSRCGCENTSENAVNAAAIAVVIRSLELEYLDLYLIHWPIAVKPGDWKLPYPEEALTSFDLKGVWKAMEECQKLGLTKCIGVSNFSCKKLENLLSFATIPPSVNQVEMNPTWQQKKLREYCQAKGIIITAYSPLGAAGTMWGSNNVVDNELLKEIAEAHGKSFAQVSLRWLYELGVTVAVKSYNKERMKQNLEIFDWSLTKDDYEKIDQQNMSSSIVPHVVLQSSSNHRNMPVIGLGTASASSTDVTKVAVLEAIKLGYRHFDTASKYGSEQPLGEAIAEALQLGLIGSRDELFITSKLWCTDNFPHLVLPALQKTLQSLKLEYLDLYLIHWPIAVKPGDWKLLYPEEALTSFDLKGVWKAMEECQKLGLTKCIGVSNFSCKKLENLLSFATIPPSVNQVEMNPTWQQKKLREYCQAKGIIITAYSPLGAAGTMWGSNNVVDNELLKEIAEAHGKSFAQVSLRWLYELGVTVAVKSYNKERMKQNLEIFDWSLTKDDYEKIDQVKQHQSTKNGPAKFIADLWDGEN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1815 599 Gene3D - 289 597 IPR036812 -
Ssu1g1815 599 Gene3D - 65 288 IPR036812 -
Ssu1g1815 599 SUPERFAMILY NAD(P)-linked oxidoreductase 299 580 IPR036812 -
Ssu1g1815 599 Pfam Aldo/keto reductase family 91 282 IPR023210 -
Ssu1g1815 599 Pfam Aldo/keto reductase family 307 577 IPR023210 -
Ssu1g1815 599 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 79 283 - -
Ssu1g1815 599 CDD AKR_AKR4A_4B 300 579 IPR044497 GO:0016616
Ssu1g1815 599 ProSitePatterns Aldo/keto reductase family signature 1. 331 348 IPR018170 GO:0016491
Ssu1g1815 599 ProSitePatterns Aldo/keto reductase family signature 2. 141 158 IPR018170 GO:0016491
Ssu1g1815 599 PRINTS Aldo-keto reductase signature 388 406 IPR020471 GO:0016491
Ssu1g1815 599 PRINTS Aldo-keto reductase signature 469 498 IPR020471 GO:0016491
Ssu1g1815 599 PRINTS Aldo-keto reductase signature 327 351 IPR020471 GO:0016491
Ssu1g1815 599 PRINTS Aldo-keto reductase signature 513 537 IPR020471 GO:0016491
Ssu1g1815 599 PRINTS Aldo-keto reductase signature 435 452 IPR020471 GO:0016491
Ssu1g1815 599 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 292 598 - -
Ssu1g1815 599 PANTHER ALDO/KETO REDUCTASE 79 283 - -
Ssu1g1815 599 PANTHER ALDO/KETO REDUCTASE 292 598 - -
Ssu1g1815 599 SUPERFAMILY NAD(P)-linked oxidoreductase 16 289 IPR036812 -
Ssu1g1815 599 ProSitePatterns Aldo/keto reductase family signature 2. 435 452 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1815 Ssu-Chr1 45376019 45393130 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1815 - - gmx:100788544 572.007