Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1796 ATGATATCAGGTCCACCTGCCTCGGGCAAAGGCACGCAATGTGAATTAATTGTGCAAAAGTTTGGATTGGTGCACATATCAACAGGGGATTTGCTAAGAGCAGAAGTAGCGGCTGGGACTGAAATTGGAAATAAAGCAAAGGAGTTCATGAAGGCGGGTCACTTGGTTCCTGATGAAATTGTGACAGCtCACGGTTGTCTCGACGAAGATGCAAAGCAAAAAGGGTGGCTTCTTGATGGGTACCCGCGGAGTTTGGGCCAAGCCCAGAGTCTGGAGAAAATGCAGATACGATCCGATGTGTATATCGTATTAGATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGCAGAAGGCTAGATCCAGTAACAGGAAAGATATATCATCTAAAATTTTTCCCACCAGAGACTGAAGAAATTAAAGCAAGGCTGATAACTCGACCTGACGACATTGAAGAGAAGGTCAAATCTCGCTTAAACATATATAAGCAAAATGCAGAATCAGTATCTTCCTCTTACTCAAACATAACACATAAGATTGATGGCAGCCATTCAAAAGAAGCagttttcaaagaaattgaATCTTTATTATCTCGATTGCACCAggataaagtgaaaataatgaaatcagGAGAAAAATCAATTCTTGATCCAAAGAAAGGACGGACATCTTTGAGCCAGGATAAGTGGAGAGGGATTCCTACTAGACTAAATAACATTCCCCATTCTCGAGAAATCAGGAAATATTTCTATGATGATGTGCTACAAGCTACGCAGAGGGCTATCAACGATGGAAAAACTAGGTTGAGGGTTGACATCAACATTCCCGAACTGAACCCAGAAATGGATGTTTATCGAATAGGTACCTTGATGGAACTTGTTCGAGCTCTTGCCCTTTCTTTTGCTGATGATGGAAAACGGGTTAAGGTTTGTGTACAAGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCATTGCAGCTTGCTGGAACTCGTAAGATTTTAGAGTTCATGGATTGGGGTGATTATGGAGCAAAAGGAACCTTCATCAATATTGGTTCTATAGGTGCTGCAGAGGTTGATGAGCAAGATGACATGTATATCTTGGTGGCTCCTCAAAATGCTGTTGGGAATTGTATTATTGATGATCTAAGAGCCATGACCAATGCTGCTGAACACAGACCAGTTATCCTAATCAATCCTAGGCTTAAGGATTTGCCCGGTTCTAGTGGTATTATGCAAACAATGGGGAGGGACCAGAGACTCAAGTATGCAGCATCATTTGAAAGTTGCTACTTCTTTCGGCTTCTGTATTATGCAGGAACCCAGTATCCCATAATGGGAGCTATCAGGTTAGACAGtaacatataa 1371 0.4099 MISGPPASGKGTQCELIVQKFGLVHISTGDLLRAEVAAGTEIGNKAKEFMKAGHLVPDEIVTAHGCLDEDAKQKGWLLDGYPRSLGQAQSLEKMQIRSDVYIVLDVPDEILIDRCVGRRLDPVTGKIYHLKFFPPETEEIKARLITRPDDIEEKVKSRLNIYKQNAESVSSSYSNITHKIDGSHSKEAVFKEIESLLSRLHQDKVKIMKSGEKSILDPKKGRTSLSQDKWRGIPTRLNNIPHSREIRKYFYDDVLQATQRAINDGKTRLRVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVDEQDDMYILVAPQNAVGNCIIDDLRAMTNAAEHRPVILINPRLKDLPGSSGIMQTMGRDQRLKYAASFESCYFFRLLYYAGTQYPIMGAIRLDSNI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1796 456 ProSitePatterns Adenylate kinase signature. 76 87 IPR033690 -
Ssu1g1796 456 PANTHER ADENYLATE KINASE 5, CHLOROPLASTIC 1 404 - -
Ssu1g1796 456 CDD ADK 1 189 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 Gene3D - 1 210 IPR027417 -
Ssu1g1796 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 199 IPR027417 -
Ssu1g1796 456 Pfam Domain of unknown function (DUF1995) 247 450 IPR018962 -
Ssu1g1796 456 PRINTS Adenylate kinase signature 76 92 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 PRINTS Adenylate kinase signature 1 14 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 PRINTS Adenylate kinase signature 29 43 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 PRINTS Adenylate kinase signature 147 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 Pfam Adenylate kinase 2 175 - -
Ssu1g1796 456 Hamap Adenylate kinase [adk]. 1 198 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 PANTHER NUCLEOTIDE KINASE 1 404 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu1g1796 456 TIGRFAM adk: adenylate kinase 1 197 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1796 Ssu-Chr1 44867981 44880983 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1796 K00939 - gmx:100818830 827.009