Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1786 ATGGCTGCTTCTGAGGGAAGGCCATTGGTGGAGGCAGCGGAACACAAGGAAGATTTCTATGACCACCAAGAGCCTAGTGGATGTGGGTATGGATGCTTTTGGGGTTGTGGGTTGAGATGGTGGCGAGGCCATGAAGAAAGTAAAGGCCTGGTGGAGCAAAGGGCTGATTCGTGGCTGAGTTGCAAGTTGAGGAAGATGAAGGAGGTTTCAGAAGTGATTGCAGGTCCCAAGTGGAAAACATTCATTAGAAAGATAAGCGGATATGGCAGGAAGCAACAGAAGAACAGGTTTCAGTATGATGAACACAGCTATGCTCTCAACTTCAATAGTGGGGCTCAGAGTGAAGATGATGAGATGCCTCCCAGTTTCTCTGCTAGATTTAGTGCTCCTTTTCCCTCTGGTCGTCGCCAAACTGAACAATGA 423 0.4823 MAASEGRPLVEAAEHKEDFYDHQEPSGCGYGCFWGCGLRWWRGHEESKGLVEQRADSWLSCKLRKMKEVSEVIAGPKWKTFIRKISGYGRKQQKNRFQYDEHSYALNFNSGAQSEDDEMPPSFSARFSAPFPSGRRQTEQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1786 140 MobiDBLite consensus disorder prediction 110 140 - -
Ssu1g1786 140 PANTHER STRESS INDUCED PROTEIN-RELATED 12 139 - -
Ssu1g1786 140 PANTHER NHL DOMAIN PROTEIN 12 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1786 Ssu-Chr1 44635459 44635881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1786 - - gmx:100815807 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0920 6 14892876 14893304 Ssu1g1786 1 44635459 44635881 PCT