Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1782 ATGCAATCCAAGAGTTTGAGCCTGGCTCCAGCTCTGACACTCTTCCCAGGCCTGAAACCCCCTCACAAAACCCTACTATTCCACCAAATCTGTGTCCTTGTTATAACATTCCTTGCTTATGCTTCCTTCCATGCCTCTAGGAAGCCTCCCAGCATTGTCAAGAGTGTTCTGGGACCCACAGTTCCATCCAATGCAACTCAAGTTCCCAACTTGAGTTCCTATGATGCAGGGTGGCCCCCTTTCAATGGAACCCAGGGCACGCACCGGCTCGGCGAGCTTGATCTGGCATTCCTTACTTCTTACTCCATTGGCATGTATTTGGCTGGTCATGTTGGAGATAGGATTGATTTGAGTTGTGGGGAGTTGGCTAGGGGAATCAAAAAGGGGCTTGATAATGGGGGTATGGAATTCGCATACCTCAGTGGGGAATATCATTGGTTCAGTTGTGGCTTCAGGGGTTTTGGAGTTTGGATGGGGTTGGTCATTTGTGGTTCCGGGACTCCTGATCATTTTGGTAGGGATTTTggtgtttttgtttcttgttgtgAACCCGGAGGATATGGGCTTTGTGCATCCTGGAATGGACATCGAAATGAGTGTTGA 603 0.4726 MQSKSLSLAPALTLFPGLKPPHKTLLFHQICVLVITFLAYASFHASRKPPSIVKSVLGPTVPSNATQVPNLSSYDAGWPPFNGTQGTHRLGELDLAFLTSYSIGMYLAGHVGDRIDLSCGELARGIKKGLDNGGMEFAYLSGEYHWFSCGFRGFGVWMGLVICGSGTPDHFGRDFGVFVSCCEPGGYGLCASWNGHRNEC 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1782 200 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 3 119 - -
Ssu1g1782 200 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 5-RELATED 3 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1782 Ssu-Chr1 44454851 44455607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1782 1 117 Organic Solute Cotransporters AT2G13100 72.650 1.93e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1782 K13783 - gmx:100813689 235.343