Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1759 ATGGATCTTGATGGAGGGAGTTCGTCAACAGTTAGCACAGGAATGCAGGCAATTCCAGGACATTCAACACGACATGGTGCATTCTATCAGTTTACACAGCAGAACCTTCCAGCATGTAAACCTGTGCTTACACCTGCAGCAGTCATTGCTACATTTCTATTGATGGGTTTCATTTTCATTCCTGTTGGACTTGTTACACTTCGTGCCTCAAATAgtGTTGTTGAAATTGTGGATAGGTATGACATCGATTGTGTACCTGAGGAATTTAGAAGTAACAAGGTCGCATATATCAAAGATGAGTCAATCTCCAAAAACTGTTCACGATTCTTAAAGGTACTTAAGCCAATGAGAGCACCAATTTATATCTATTATCAGCTTGATAACTATTACCAGAACCACCGACGGTATGTCAAAAGTAGAAGTGACCTGCAGCTCTTACATGGACTTGGATATAATGACACCAGTTCTTGTAAGCCTTTAGGGTCCTCCCGTGATCTTCCAATTGTACCTTGTGGGTTGATAGCATGGAGTTTGTTCAATGATACATATATGTTCAGTCGCGGGCCATCAGAATTGAAGGTCAATAGGAAGAATATTGCATGGAAGAGTGATCGCAATTACAAATTTGGAAAGCATGTTTACCCATTTAATTTTCAGAATGGGACTTTGATTGGGGGTGGAAAGCTGGATCCAAGTATTCCTCTTAGTGATCAAGAAGATCTCATAGTTTGGATGCGGACTGCTGCTCTCCCTAGCTTCCGAAAGTTATATGGTAGAATTGAAGAGGATTTGGATGCAGATGATGTTATAGTAGTCCACCTGAAGAATAACTATAATACTTACAGTTTTGGCGGAAAGAAGAAGCTTGTTCTGTCAACAACAAGTTGGCTGGGTGGAAAAAATGACTTCCTTGGAGTTGCCAATTTATTTGTTGGTGCCTTTTGTGTATTGATCTCCATCATCTTCCTGTTGCTTCATGTGAAAAATCCTAGaCCCTATGGGGACACGACCTACTCATCTTGGAATAGGAAAAACGTTGCTAGCTGA 1047 0.4059 MDLDGGSSSTVSTGMQAIPGHSTRHGAFYQFTQQNLPACKPVLTPAAVIATFLLMGFIFIPVGLVTLRASNSVVEIVDRYDIDCVPEEFRSNKVAYIKDESISKNCSRFLKVLKPMRAPIYIYYQLDNYYQNHRRYVKSRSDLQLLHGLGYNDTSSCKPLGSSRDLPIVPCGLIAWSLFNDTYMFSRGPSELKVNRKNIAWKSDRNYKFGKHVYPFNFQNGTLIGGGKLDPSIPLSDQEDLIVWMRTAALPSFRKLYGRIEEDLDADDVIVVHLKNNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLFVGAFCVLISIIFLLLHVKNPRPYGDTTYSSWNRKNVAS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1759 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 8 347 IPR005045 GO:0016020
Ssu1g1759 348 PIRSF Lem3/Cdc50 6 344 IPR005045 GO:0016020
Ssu1g1759 348 PANTHER ALA-INTERACTING SUBUNIT 2-RELATED 8 347 - -
Ssu1g1759 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 67 331 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1759 Ssu-Chr1 43679637 43687225 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1759 - - gmx:100789806 671.389