Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1756 ATGATGATGTCTGTGGGGACTTCCAATTCCAGCCTATGCGTCTTTCCAGTGAATATTCCGGTCAGTGGAGAGAGGAACCTCGCCGGAGAACCTCCCCGGAAAATGGACGAGTCATGGAGAATGCGAATGGGCCTAACGCCGGGCCTCCCTCGCCGGCGATCCATGGAGGACCGCTCCTCCTCCCGCACACGCCGTTCCATATTCGCCGGCGCCGCCGAGCCGGAAACGCTGGACCCCGACGACTTCGCCGACGTCTTCGGGGGCCCGCCGAGGAGCCTCCTGGGGCACAAGTTCTCGAGGTCCAATTCGTTCTACGAGGAAATTTTCCGGCCGCCGGAGTTCGCCTCTCCGGTGCCGGCGAAGGGAGGCCGGAGCTTGCCGGTGTTCAGGATTCCGGCGAAGAACGAGGCGTTCTACAGCGACATATTCGTGTCGGACGATGACCGGCGGTCGCGGGAGAGGTCGGGGCCGCAGTCGAAGGCGAAATCGAAGTCAAATTCGTCGTCGGCGCTGAGTTCCGAGGAGCTGAGCCCTCTCCGGCCGGCGATCGGCGATGACGTGGCATTGTCTGCCTTTGCTTCCAAGCTCAGGCCAATCAATGTCCCATGCAGATGGAACTCAACCACTATGATGCCTGGGGAACACCCAATTAAACAAGGAGGGTCACTTTTTCCATGCAATAGTCAGTTATTTGAAATTCAGTGTCAGGACAGTGAGTACAAGGAGAGTTTCAAGAGTTCTCATTTGGGATTCTCAAGAAGAGTCTCCTCCCCAGAAACAATTAGTCTTGAATCCAATTCATATCAAAGCATGAAGGTATCCGCTGATGACTGGGAACTCAGTTCCCCGTTTTCTGCTGTCTCTGGACTTTGTCAAGAACCTGAGGCAAAATCTTCAGTTTATGATCATATGCTTCCAGAACTGGTTATAGAACAGGACGACGATGAAGTTATGAGCTCCTACGTCATAGAGGTCAACTCCAACCTCAGAGAGGGAAGTTTTGGAACTGCAGACATTGATGAAGCAATAGCATGGGCCAAAGAGAAGTTTCAATCACGAAATTCTGATGAAGAATCAAGCTTGAGAAATGAAGGCAATGAGCAAACTACAGGGGTGGAAGGAAGGTCTGATGCAGGCGAATGCCATGGTGATGGAATAGGAAACGTTAAATCTTCGAAGAAGGTACAGACAGAAACAGAGAAGTTGGATAGAGATCTAAGATTGTGGTCATCTGGCAAGGAAACTGACATCCGGCTACTCCTTTCAACACTGCATCAGATTTTATGGCCTGAGAGTGGCTGGTATGCGGTTCCTCTTACGAACTTAATTGAAAGTTCACAAGTGAAGAAGGCCTATCAAAAAGCAAGATTATGCCTCCACCCTGACAAACTGCAGCAAAGAGGAGCAACACTCTTACAGAAGTATGTAGCAGAGAAGGCATTCTCCATTCTCCAGGATGCATGGACTGCATTCATTTCTGAAGACGTTTCCTTCTAA 1497 0.5104 MMMSVGTSNSSLCVFPVNIPVSGERNLAGEPPRKMDESWRMRMGLTPGLPRRRSMEDRSSSRTRRSIFAGAAEPETLDPDDFADVFGGPPRSLLGHKFSRSNSFYEEIFRPPEFASPVPAKGGRSLPVFRIPAKNEAFYSDIFVSDDDRRSRERSGPQSKAKSKSNSSSALSSEELSPLRPAIGDDVALSAFASKLRPINVPCRWNSTTMMPGEHPIKQGGSLFPCNSQLFEIQCQDSEYKESFKSSHLGFSRRVSSPETISLESNSYQSMKVSADDWELSSPFSAVSGLCQEPEAKSSVYDHMLPELVIEQDDDEVMSSYVIEVNSNLREGSFGTADIDEAIAWAKEKFQSRNSDEESSLRNEGNEQTTGVEGRSDAGECHGDGIGNVKSSKKVQTETEKLDRDLRLWSSGKETDIRLLLSTLHQILWPESGWYAVPLTNLIESSQVKKAYQKARLCLHPDKLQQRGATLLQKYVAEKAFSILQDAWTAFISEDVSF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1756 498 CDD DnaJ 434 488 IPR001623 -
Ssu1g1756 498 MobiDBLite consensus disorder prediction 354 395 - -
Ssu1g1756 498 MobiDBLite consensus disorder prediction 147 177 - -
Ssu1g1756 498 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 35 493 - -
Ssu1g1756 498 MobiDBLite consensus disorder prediction 160 175 - -
Ssu1g1756 498 Gene3D DnaJ domain 393 496 IPR036869 -
Ssu1g1756 498 MobiDBLite consensus disorder prediction 44 69 - -
Ssu1g1756 498 SUPERFAMILY Chaperone J-domain 392 494 IPR036869 -
Ssu1g1756 498 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 35 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1756 Ssu-Chr1 43509358 43513941 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1756 - - gmx:100801416 824.698