Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1729 ATGGTGAAAACGGAGATTGAGAAGAAGGGTTGCAGAACGCGATGGCTTTGGGTGGTGGTGGCTCTCGTGGCCGTGTTTGTTGCCATGGCCATGTCTTCCAGAACCTCTCCCAGAATAGCACTATTTGGAGCCATTGACAGAGCTTGTCAGTGTTCTCGGGGTACATCGAAGTACAGTGGCATGGTGGAGGATTGTTGTTGTGATTATGAAACTGTGGATCGTCTCAATGAGGAAGTGTTGCACCCTTCCCTCCAGGAGCTCGTGAAGACCCCTTTCTTTCGATATTTCAAGGCTAAGTTATGGTGTGACTGCCCTTTCTGGCCTGATGATGGCATGTGCCGGTTGCGGGACTGTAGCGTATGTGAATGCCCAGAAAACGAGTTCCCCGAATTATTTAAGAAGCCTCATCGCCTCTCAATGAATGATCTTGTTTGTCAAGAAGGAAAACCTCAGGCAGCTGTTGACCGTACTTTAGACAGTAAAGCTTTCAGAGGATGGACAGAAATAGACAATCCATGGACAAATGATGATGAGACTGACAATGATGAGATGACATATGTGAATCTTCAACTGAATCCTGAAAGATATACTGGTTACACTGGTCCATCTGCAAGAAGAATATGGGATGCTGTCTACTCGGAGAACTGCCCCAAATACCCATCTCAAGAGTTATGCCAAGAggaaaagattttgtataaattgATATCCGGTCTTCACTCCTCCATATCAATACATATAGCTGCTGATTATCTACTTGATGAAGCTACAAATTTGTGGGGCCAAAATCTTACTTTGTTGTATGATCGCGTCCTAAAATACCCTGATCGCGTCAGGAAtttgtatttcacttttctcttTGTCCTGCGAGCAGTAACCAAAGCTACAGATTATCTGGAACAGGCAGAGTATGATACCGGTAACCCCAATGAGGACCTTAAGACACAATCCTTGATAAAACAACTACTTTACAACCCCAAGCTTCAAGCTGCATGTCCAATTCCATTCGATGAAGCTAATTTGTGGAAAGGCCAAAGTGGACCTGAGCTAAAACAGAAAATTCAACAACAATTCAGAAACATCAGTGCATTGATGGATTGTGTAGGATGTGAGAAGTGTCGATTATGGGGGAAACTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCAAGCTCTGCAGCTGCAAAGGAATGAAGTAATTGCATTGATGAACCTTCTCAATCGGCTTTCCGAATCTGTCAAATTCGTCCATGAAGTGGGACCTACAGCTGAAAGAATCATGGAAGGACATGTTTCTGCTCATACAACGTTGATTAGTTCATGGAAAAAAATGTGGTCCTATGTGTCTGAAACTTAG 1389 0.4262 MVKTEIEKKGCRTRWLWVVVALVAVFVAMAMSSRTSPRIALFGAIDRACQCSRGTSKYSGMVEDCCCDYETVDRLNEEVLHPSLQELVKTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPELFKKPHRLSMNDLVCQEGKPQAAVDRTLDSKAFRGWTEIDNPWTNDDETDNDEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPKYPSQELCQEEKILYKLISGLHSSISIHIAADYLLDEATNLWGQNLTLLYDRVLKYPDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNPNEDLKTQSLIKQLLYNPKLQAACPIPFDEANLWKGQSGPELKQKIQQQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVDGQENSSQALQLQRNEVIALMNLLNRLSESVKFVHEVGPTAERIMEGHVSAHTTLISSWKKMWSYVSET 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1729 462 PANTHER ENDOPLASMIC RETICULUM OXIDOREDUCTIN-2 1 458 - -
Ssu1g1729 462 PIRSF ERO 12 462 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Ssu1g1729 462 PANTHER ERO1-RELATED 1 458 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Ssu1g1729 462 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 80 426 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Ssu1g1729 462 SUPERFAMILY ERO1-like 67 437 IPR037192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1729 Ssu-Chr1 42903449 42909093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1729 K10950 - gmx:100798225 848.195