Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1728 ATGCAAGTGATGAAATCTGCCACACAAGTGGAGGCAACAccaccgccgccaccaccaccactatcctCATCACTGTCGCTAGGACTTGACATGATGAGACCCTATGAGATGGTGCACCACCTGGTCTCATGCAACGCGGTGGTGGTGTTCAGCACAAGCGACTGCTGCATGTCTACCGTGGCCAAGCGCCTCCTCTTCAGCCTCGGCGTCGGCCCCATTGTGGTGGAGCTCGACGAGCAGGCCGACGGCCCCGGTATCCGGTCGGTCCTCAACCAGCTTTCCGGTGTCCACCAGCCAGTCCCCGCCGTCTTCATTGGCGGCAAGTTCCTTGGTGGTGTGCAAACCCTCATGGCCAGCCACATAAACGGCACCTTGGTTCCTCTCCTCAAAGATGCTGGGGCTCTATGGCTCTGA 414 0.5483 MQVMKSATQVEATPPPPPPPLSSSLSLGLDMMRPYEMVHHLVSCNAVVVFSTSDCCMSTVAKRLLFSLGVGPIVVELDEQADGPGIRSVLNQLSGVHQPVPAVFIGGKFLGGVQTLMASHINGTLVPLLKDAGALWL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1728 137 Gene3D Glutaredoxin 31 136 - -
Ssu1g1728 137 Pfam Glutaredoxin 47 109 IPR002109 -
Ssu1g1728 137 PANTHER GLUTAREDOXIN 30 137 IPR011905 -
Ssu1g1728 137 SUPERFAMILY Thioredoxin-like 35 136 IPR036249 -
Ssu1g1728 137 PANTHER GLUTAREDOXIN-C9 30 137 - -
Ssu1g1728 137 MobiDBLite consensus disorder prediction 1 23 - -
Ssu1g1728 137 CDD GRX_GRXh_1_2_like 46 128 - -
Ssu1g1728 137 TIGRFAM GlrX-like_plant: glutaredoxin-like family 38 137 IPR011905 -
Ssu1g1728 137 ProSiteProfiles Glutaredoxin domain profile. 35 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1728 Ssu-Chr1 42837954 42838367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1728 36 137 Miscellaneous Gene Families AT4G15700 48.039 1.23e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1728 K03676 - gmx:100775537 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1728 1 42837954 42838367 Ssu1g1728 1 42837954 42838367 ECH