Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1706 ATGGAGGTGTCGTCGGAGCAATCTGGCGAAGACGTGGCACCAGAAAAGCCCCAGAGTTCTCCAAAGAAGAATGTTTCAGAAGCTTCGAGAAGAGCTGCGAGAACCGCCTCGGATTCTGGCGGTTCTGTTTCTGCGAAAAGGAAAGTCGAACCGCGAACCGGTTTAGGAACTGGTTCGGGTTCAGGTTCGGTTGCGACGAAGAGATCGGGTTCAATCGGAGGTTCCGCGAGTGCGGTTTCTGCGCCGAGACGGAGCAGCACCGGAGGATTGCTTCAGAAGGCGTCGATTTCcgatggaagaagaaaaaccGGTTCAGATTCTTCCGCCGGAGCTAAGAGCGGCGCTTCGTCGGCGACCGAACCTGCACGGAGGTCGCTTCCGGAGCTCCAGGCGCAGTTCCTTAACTTCTTCGCGTGCCGGCGCTGTGGCAAAGTCGATTGCGGCCTCGCCGGCGGGCTCGGCTTCGAGGACTTCCGGTGCGATTCTTCATCGGTTGATAGCACCGGGAGCAGTGGCAGTTCTGCTCGGAGGACGGTTTCGAGGGTTTCGTCGCCGACGGTGTCCAGCGGGTTGAAGGCGGGGTCTCTGTCGACGTCGCAGGATAGGACTTCTGCACTGTCTGGGAGGAGGAAGGGGGGGACTCCTGATAGCAGGGATTCGCGGTTTATTGTTCTTCCGCAGGTTGAGATTAAGGGCAATGATGATTTGAGGCTGGATCTTAGGGGACACAGAGTTCGCAGTCTCAATGCCAGTGGATTAAACTTATCCTCAAACTTAGAGTTTGTTTATCTCCGGGACAATCTCTTGTCTACAATGGAAGGCGTAGAAATATTGACGAGAGTGAAgGTTCTTGATTTgagttttaatgattttaagggGCCTGGATTTGAGCCTCTTGAAAATTGCAAAGTACTGCAGCAACTCTACCTTGCTGGAAATCAAATCACATCATTGGCAAGTCTCCCTCAGCTTCCTAATTTGGAGTTCCTCTCAGTAGCTCAGAATAAGTTGAAATCTCTCACTATGGCAAGCCAACCTCGACTCCAGGTCTTAGCTGCcagcaaaaacaaaatttctacTCTTAAGGGTTTTCCATATTTACCTGTTCTTGAGCATTTGCGAGTGGAGGAGAATCCTATACTTAAGATGCCTCATTTGGAAGCAGCCTCAATATTGCTAGTTGGACCTACCTTGAAAAAATACAATGATAGAGATCTCTCTCGGGAGGAAGTGGCACTAGCAAAGCGTTATCCTGTGCATACAGCTTTGTGCATTAGAGATGGTTGGGAGTTTAGCCGTCCTGAGCATGCTGCAGAGTCAactttccactttttagttgaGAAATGGAAGGACCGTATTCCTCCTGGGTTTTTTCTCAAAGAAGCCTCCATAGATAAACCTGTGGAAGAAGATATGTGTTGTTGTCATTTCACAATTATTCATGATGATGCAGCTAGTACAGACACaccattagttttaaaatatcaatggtTTTATGGTGATATATCACTTTCAAACTTTGTCCCTATTCTAGATGCTACTGATGAGaTTTACTGGCCAAAGCATGATGACATTGGGAAAGTTCTGAAAGTGGAATGCACTCCCACTTTGGGAGAAATGGAGTATCCTCCTATATTTGCCATCTCTTCCCGTGTTTCACGAGGGAATGGAATTCCGAAGGTTGTAAACCTTGAAGTGCATGGGGAACTAGTAGAAGGAAGTATTGTCAGGGGTTGTGCTAAGGTTGCATGGTGTGGTGGAACACCAGGAAAAGGTGTTGCTAGTTGGTTACGGAGAAAGTGGAATAGCAGTCCTGTGGTCATTGTTGGGGCAGAAGATGAAGAGTATCGGCTAACCATTGATGATGTTGATTCAAGTTTAGTTTTCATGTACACACCAGTAACAGAAGAAGGTGCCAAAGGAGAACCTCAATACAAATATACAGATTTTGTAAAAGCTGCTCTTCCTTCTGTCAGTAATGTTAAAATAGTTGGAGATGCAGTTGAGGGAATTACCATCAAAGGAGTTGGTGATTATTTTGGTGGAAGGGAGGGTCCCAGCAAGTTTGAATGGTTACGGGAGAACAGGGATTCTGGAGGCTTTTTGTTAGTGTCAGCGGGTACATCTGAGTATGCCTTGACCAAAGAGGATGTTGGTTGTTGTTTGTCTTTTGTGTACATACCCATTAATTTTGAAGGTTTACCATCCAGACTTGATCAATGTATCTTTTCCAAATACTTCACCCCCAAAAGTAACGAATGTCAAATAATTGGTGATCTACGAGAGAATAGCAAGGTCACTGCAACTGGTATTGTAACCGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTATAAAACACGTTCATCAACTTTGGATGAAAACAGTCTTGAAGCATTAAGTACTTCCAAAATTGCTAAAGCATTCCGCATACCTCTTGGAGCTGTTGGCTATTACATTGTGGCAAAATTTACACCCATGACTCCTGATGGTGATTCTGGTGAACCAGCATTTGTAATATCTGATAAAGCAGTTGAGACTCTTCCCCCAAGCTTGAATTTCTTATCTATCATTGGAGATTACAGTGAAGATGGAATATTGACAGCTTCATATGGATATGTTGGAGGTCATGAAGGAAAAAGTATATACAGTTGGTATATTCATGAGGTTGAAGGGGATTCAGGTTCTTTGATACCAGGGGTTTCAGGACTGCAGTATCGTATTACCAAAGAAGCCATTGGAAAATTCATCTCATTCCAGTGTACTCCAGTGCGTGATGATGGTGTTGTAGGTGACCTACGAATTTGCATGGGCCAGGAGCGCGTTCACCCTGGAAGCCCTAGATTGCTTTCTTTACGCATAGTTGGAAATGCTGTTGAAGGAACAATTCTAAGAACAGAAAAAAAGTATTGGGGTGGTGAAGAGGGAGATTCAATTTACCGCTGGCTTAGGACTAGTTCTGATggcacaaaaaaagaaattgcgGGTGCCACCACTGCATCGTATATGCCCTCAATTGATGACATTGGCTCCTTCATTTCTGTATCATGCGAGCCTGTCCGAAGTGATTGGGCTCGTGGACCCATGGTTCTGTCTGAACAAATTGGACCTATAATACCAGGTCCCCCAACTTGTCATTGTCTGGAATTTCTTGGATCAATGATAGAAGGGCAGCGCTTGAACTTTAATGCTGTGTATATTGGAGGGGAGCGAGGAGATTGTACCCATGAGTGGTTTAGGGTAAAAGACAATAGTGTACAAGAGAAAATAAGTAGCAATGATTTTTTGGATTTGACTCTTGAGGATGTTGGTGCGTGCATTGAAATAATCTATACTCCTGTGCGCAAAGATGGAATCAAAGGCAGCCCAAAGAGCATAGTGTCTGATCCTATTTCTCCtgCGGATCCTAAGGGAATGGAACTTGTAATTCCTGACTGCTGTGAAGGCAGAGAGCTGATGCCACTGAGAAAATATTTTGGTGGACATGAAGGGGTTGGAGAGTATATTTGGTATCAGACAAAGCATAAACTTGAAGGATCTGAATTACTAGATATATCTAATGCTTCTGATCTTGTAATATGTGGGACAGAGCCAACATATAAACCATTACTTAAAGACGTTGGAGCTTATTTGGCTTTGTATTGGGTGCCTACTCGTGTAGATGGCAAATGTGGGGAGCCATTGATTGCAATTTGTAGTACCCCAATTTCCCCTGCTCCTCCAGTAGTTTCTAATGTACACGTGAAAGAGTTGTCTTCTGGAATTTATTCTGGAGAAGGTGAATATTTTGGTGGACATGAAGGAGAAAGTCTCTGTAGCTGGTATAGAGAAAATAATGAGGGAACCACTGAACTGATTAATGGGGAAAATTCTAAAGTCTATGAAGTTACAGATTCAGATTACAATTGTCGTTTGTTTTTTGgATATACACCTGTTCGTTCAGATTCAGTCGTGGGAGAACTCATATTATCTAATCCAACTAACATTGTTCTCCCAGAGCTTCCATATGTGGAGATGCTTGCTCTGACCGGAAAGGCAGTTGAAGGTGACTTACTTACAGCTGTTGAAGTGATTCCAAATAGTGAGACTCAACAACATGTTTGGAGCAAGTACAAGAAAGATATAAGATACCAATGGTTTTGTTCATCAGAAGTGGGAGACAATTTTTCATATGATCCAATATCTAATCAGAGTTCTTGCTCCTATAAGGTGCGGCTAGAGGATATTGGTCATCATTTGAAATGTGAGTGTATCGTAACTGATGTGTTTGGAAGGTCAGCTGAGGCAGTATGTGTTGAGACAACACCCGTAATGCCAGGGATTCCTAGAATACACAAGCTGGAGATTGAAGGAAGGGGATTTCATACCAATCTCTATGCTGTTCGTGGCATTTACAGTGGCGGGAAGGAAGGCAAAAGTAGAGTTCAGTGGCTTAGATCAATGGTTGGAAGTCCTGACCTGATCTCTATACCTGGAGAAACAGGCAGAATGTATGAAGCGAATGTTGATGATGTTGGCTATAGGCTGGTGGCCATCTATACTCCTGTAAGAGAGGATGGAGTAGAGGGCCAATCCATTTCAGTATCCACAGAGCCAATTGCAGTTGAGCCTGATGTTCTTAAAGAAGTGAAGCAGAACCTTGATCTTGGATCAGTGAAGTTTGAGGTATTGTGTGACAAAGACCAAACCTCAAAAAAGATTTCATCAGTGGGCACATATGAGAGACGTATCCTTGAAATTAACAGGAAAAGAGTCAAGGTGGTAAAGCCGGCTACTAAGACTTCTTTTCCAACTACAGAGATTCGTGGTAGTTATGCCCCTCCCTTCCATGTGGAGCTTTTTAGGAATGATCAACACCGTCTAAAGATAGTTGTGGACAGTGAGAATGAAGCAGACTTGATGGTGCAGTCCCGACACATTCGGGATGTCATTGTTCTTGTGATTCGAGGACTTGCTCAGCGATTCAATAGTACTTCCCTCAATTCCCTTCTCAAGATAGAGACATAA 5007 0.4322 MEVSSEQSGEDVAPEKPQSSPKKNVSEASRRAARTASDSGGSVSAKRKVEPRTGLGTGSGSGSVATKRSGSIGGSASAVSAPRRSSTGGLLQKASISDGRRKTGSDSSAGAKSGASSATEPARRSLPELQAQFLNFFACRRCGKVDCGLAGGLGFEDFRCDSSSVDSTGSSGSSARRTVSRVSSPTVSSGLKAGSLSTSQDRTSALSGRRKGGTPDSRDSRFIVLPQVEIKGNDDLRLDLRGHRVRSLNASGLNLSSNLEFVYLRDNLLSTMEGVEILTRVKVLDLSFNDFKGPGFEPLENCKVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNKISTLKGFPYLPVLEHLRVEENPILKMPHLEAASILLVGPTLKKYNDRDLSREEVALAKRYPVHTALCIRDGWEFSRPEHAAESTFHFLVEKWKDRIPPGFFLKEASIDKPVEEDMCCCHFTIIHDDAASTDTPLVLKYQWFYGDISLSNFVPILDATDEIYWPKHDDIGKVLKVECTPTLGEMEYPPIFAISSRVSRGNGIPKVVNLEVHGELVEGSIVRGCAKVAWCGGTPGKGVASWLRRKWNSSPVVIVGAEDEEYRLTIDDVDSSLVFMYTPVTEEGAKGEPQYKYTDFVKAALPSVSNVKIVGDAVEGITIKGVGDYFGGREGPSKFEWLRENRDSGGFLLVSAGTSEYALTKEDVGCCLSFVYIPINFEGLPSRLDQCIFSKYFTPKSNECQIIGDLRENSKVTATGIVTGGTEGSSRVQWYKTRSSTLDENSLEALSTSKIAKAFRIPLGAVGYYIVAKFTPMTPDGDSGEPAFVISDKAVETLPPSLNFLSIIGDYSEDGILTASYGYVGGHEGKSIYSWYIHEVEGDSGSLIPGVSGLQYRITKEAIGKFISFQCTPVRDDGVVGDLRICMGQERVHPGSPRLLSLRIVGNAVEGTILRTEKKYWGGEEGDSIYRWLRTSSDGTKKEIAGATTASYMPSIDDIGSFISVSCEPVRSDWARGPMVLSEQIGPIIPGPPTCHCLEFLGSMIEGQRLNFNAVYIGGERGDCTHEWFRVKDNSVQEKISSNDFLDLTLEDVGACIEIIYTPVRKDGIKGSPKSIVSDPISPADPKGMELVIPDCCEGRELMPLRKYFGGHEGVGEYIWYQTKHKLEGSELLDISNASDLVICGTEPTYKPLLKDVGAYLALYWVPTRVDGKCGEPLIAICSTPISPAPPVVSNVHVKELSSGIYSGEGEYFGGHEGESLCSWYRENNEGTTELINGENSKVYEVTDSDYNCRLFFGYTPVRSDSVVGELILSNPTNIVLPELPYVEMLALTGKAVEGDLLTAVEVIPNSETQQHVWSKYKKDIRYQWFCSSEVGDNFSYDPISNQSSCSYKVRLEDIGHHLKCECIVTDVFGRSAEAVCVETTPVMPGIPRIHKLEIEGRGFHTNLYAVRGIYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGVEGQSISVSTEPIAVEPDVLKEVKQNLDLGSVKFEVLCDKDQTSKKISSVGTYERRILEINRKRVKVVKPATKTSFPTTEIRGSYAPPFHVELFRNDQHRLKIVVDSENEADLMVQSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIET 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1706 1668 MobiDBLite consensus disorder prediction 101 120 - -
Ssu1g1706 1668 MobiDBLite consensus disorder prediction 1 42 - -
Ssu1g1706 1668 Gene3D - 948 1026 - -
Ssu1g1706 1668 Gene3D - 478 541 - -
Ssu1g1706 1668 Gene3D - 1335 1434 - -
Ssu1g1706 1668 Gene3D - 851 932 - -
Ssu1g1706 1668 ProSiteProfiles Leucine-rich repeat profile. 304 325 IPR001611 GO:0005515
Ssu1g1706 1668 MobiDBLite consensus disorder prediction 162 219 - -
Ssu1g1706 1668 PANTHER 187-KDA MICROTUBULE-ASSOCIATED PROTEIN AIR9 15 135 - -
Ssu1g1706 1668 PANTHER 187-KDA MICROTUBULE-ASSOCIATED PROTEIN AIR9 161 1668 - -
Ssu1g1706 1668 MobiDBLite consensus disorder prediction 162 207 - -
Ssu1g1706 1668 MobiDBLite consensus disorder prediction 56 93 - -
Ssu1g1706 1668 PANTHER EXPRESSED PROTEIN 15 135 - -
Ssu1g1706 1668 PANTHER EXPRESSED PROTEIN 161 1668 - -
Ssu1g1706 1668 SUPERFAMILY Outer arm dynein light chain 1 237 391 - -
Ssu1g1706 1668 Gene3D Ribonuclease Inhibitor 236 313 IPR032675 -
Ssu1g1706 1668 MobiDBLite consensus disorder prediction 1 123 - -
Ssu1g1706 1668 Gene3D Ribonuclease Inhibitor 314 415 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1706 - - gmx:100807099 2891.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1706 1 41991791 42052996 Ssu1g1706 1 41991791 42052996 ECH