Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1705 ATGGATTCCCCACCTTCCCAGCAATCGTGGGGAAGGTCACCCACCTCCGcctcctcctcctctctctcCAGATCCAATTCCGACGCCATCCAGAGCCTCTCCTCGATCCTCAACAACCCCCACGCCTCCGACGCCGCCTCCTGGGTCGGCTGGTGGTCCTCCGCCACCGCCGTCGCCCCGCCCGAGTTCGCCCCCATCGCCGCCGCCAAGGCCGCCTCCGACGTCGCCCGATCTGACTTCCTCCCCTACCTCGCCCCCATCGCCGACGCCTTCCACCGCTTCGAGGACATCCGCAACCACGCCACCAAGGAGATCAACGCCGGCGCCGGCGACGCCGCCTCCGCCGGCCAGGGCGAGGCCCTCGTCGCGTGCCTCCGCGAGGTCCCCGCGCTCTACTTCAAGGAGGACTTCCGCCTGGAGGACGGCGCCACCTTCCGCGCCGCCTGCCCCTTCGCCAACGTGGCCGAGAACCTCGCGCTGCAGGAGAAGCTCTCGCACTACCTCGACGTCGTGGAGCTTCACCTCGTGAAGGAGATCTCGCTCCGGTCCTCGTCGTTCTTCGAGGCGCAGGGGCAGCTGCAGGACCTCAACGCTAAGATCCTCCACGGGTGCGCGCAAATTCGGCACCTCAAGGACACCATTCGCCTCCTCGACGCCGATTTGGTCCACGACGCGCGCCAGATTCAGGAGCTCAATGGCACCCGGACTAACCTCTTGGCGCTCCTGCAGAAACTCAGGCTTATATTATACGTCAACCAGGCCCTCTCCGCTCTCAAATTGCTTGTTGCGTCTGCAGATTGTGCCGGAGCACTGGATGTGACTGATGATTTGCAACATTTGCTGGATGGAGATGAGCTCACTGGTCTGCATTGTTTTCGTCATCTTAGAGATCATGTAATAGGCTTTATAGAATCCATAAACAGCATTCTTTCGGCAGAGTTTATTCGAGCTTCCTTACACGATGCTGCAGAAAAGGATGTGATAATTTTATCCAAAGCTAAAGCAAGAGCTTCCCTTCCAATGAATGGAAAGGATGATGAAGTAAagttggaagaagaagaaaccaaTAATTTCAAAGATAGTCTTCTTCCTACTGTAATTGGATTGCTTAGAACTGCTAAACTTCCCTCTGTTCTGAGGACTTATCGAGATACACTGACTGCTGATATGAAGAGTGCTATTAAGACCGCTGTTGCTGAGTTGCTTCCTGTTCTTGCTTCTCGAGGTTCAGAGTCAGAGTTCTTTTCTGGAGACAGAGCTGTAGATGCAGATGGTGGAGGTGCATCACTTGCTAGCAAGTTGAGGAGCCTATCATCTGATTGCTTTGTGCATCTTCTGAGTGCTATTTTCTTGATAGTACAGGCACATTTAGTTCGGGCTGCTGAAGTGAAAAAGGCCATTGAATGGATTTTGAGCAATCGTGATGGTCATTATGCTGCTGATTCAGTTGTGGCAGCAATTGCTCATGGTGCTGCGGCCGCAGAAACATCCCAAGAAAGCGAGGCTCATGGTACTACATTTTTGCCATATTCACCACAAAGAAGTGTTGCCAAGGGTTCTTCAATTCAGGGAAAAACAATTGATGCTGTGAGCTCCTCAAACATGACAAAAAATTTCAGAGTTGATATATTGCGAGAAAACGCAGAAGCTGTCTTTGCAGCATGCGATGCTGCTCATGGAAGATGGGCGAAGCTTCTTGGGGTCCGTGCAATTCTCCATCCTAGGTTGAAATTGCTGGAGTTTCTAACCATATACAACATCACCCAGGAGTTCATTACTGCTACAGAAAAAATAGGTGGGAGATTGGGATACAGCATCCGCGGGACACTGCAATCACAGGCCAAGGCTTTTGTTGATTTTCAGCATGAATCTCggATGGCAAAGATTAAGGCAGTGCTTGACCAGGAAACCTGGGTGGAGATAGATGTTCCTGATGAATTCCAATCCATCATCAATTTGCTTTTTACATCTGATGCATTGACTTCTGAGAACCTTAATGGCACTGAGGATGATATTTCAACTAGTTACAATGGTGTGGTGACTAACAATGATGTTCTGCCAATGGCAGACAGTGCACAGTCAAGTGCTGAACAGCAAATTACACGGGCTAATTCCATTGAAGCGTCTATGAATAGTGAAGCATCAGATAGATCCAAATCCCCCGTTGATTCAGGGGAACCAAATAAAGCTCATGGTAGGATTTCATCAGCACATAGTAACAATACTGAGAAAGACCATAAAAAATCTGCATCTCAGGCTCTTATTTACAAAGGTGTTGGTTATCACATGGTAAACTGGTTAGTTATCTGGATTTAA 2316 0.4948 MDSPPSQQSWGRSPTSASSSSLSRSNSDAIQSLSSILNNPHASDAASWVGWWSSATAVAPPEFAPIAAAKAASDVARSDFLPYLAPIADAFHRFEDIRNHATKEINAGAGDAASAGQGEALVACLREVPALYFKEDFRLEDGATFRAACPFANVAENLALQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLNAKILHGCAQIRHLKDTIRLLDADLVHDARQIQELNGTRTNLLALLQKLRLILYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDHVIGFIESINSILSAEFIRASLHDAAEKDVIILSKAKARASLPMNGKDDEVKLEEEETNNFKDSLLPTVIGLLRTAKLPSVLRTYRDTLTADMKSAIKTAVAELLPVLASRGSESEFFSGDRAVDADGGGASLASKLRSLSSDCFVHLLSAIFLIVQAHLVRAAEVKKAIEWILSNRDGHYAADSVVAAIAHGAAAAETSQESEAHGTTFLPYSPQRSVAKGSSIQGKTIDAVSSSNMTKNFRVDILRENAEAVFAACDAAHGRWAKLLGVRAILHPRLKLLEFLTIYNITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMAKIKAVLDQETWVEIDVPDEFQSIINLLFTSDALTSENLNGTEDDISTSYNGVVTNNDVLPMADSAQSSAEQQITRANSIEASMNSEASDRSKSPVDSGEPNKAHGRISSAHSNNTEKDHKKSASQALIYKGVGYHMVNWLVIWI 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1705 771 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g1705 771 MobiDBLite consensus disorder prediction 707 748 - -
Ssu1g1705 771 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 1 769 - -
Ssu1g1705 771 PANTHER VACUOLAR PROTEIN SORTING 54 1 769 IPR039745 GO:0000938|GO:0042147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1705 K17600 - gmx:100804432 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1705 1 41945467 41959826 Ssu1g1705 1 41945467 41959826 ECH