Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1700 ATGGCGGCTTCTGATCCCAACAAGTTGATGACTAAAGCCGATAAACTAACAAGACTCAGTCTTACTAGGTGGAGTGCAGATTGGAAAAGTGCTACTGTTCTTTATGAGCAGGCGGCTAATGGGTTTAGAGTTGCCAGGGACTATGAGAAAGCCAAAATAGCATATGAGAAAGCTTCGAAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCTGCTCTGGCAAAGGATCTAAGCCACTGGCAAGAAGTTGGGGACTTCTATCGAAGGGCATCTGAATTGTACATGGAGTGTGGGAGACCACAACCTGCATCAGACGCTCTTGCAAAGGGAGCCCGTGCTTTGGAAGATAGCATGTCTGAAGAAGCTATTCAGCTATATACAGATGCTTGTACAATTCTTGAAGATGATGGAAGAGAACAAATGGCCTTTGATCTTTACCGTGCTGCcactaatgtttatataaaacttgaaaaATATACAGATGCAGCATCTTTCATGTTGAGGTTGGGCTTGGCGGCTGACAAGTGTAATGCTACCAATAGCCAGTGCAAGGCATATCTTAGTGCAATTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCTGAGAAGTGCTATAATGACTGTTCTCAGATTGACGCTTTTCTGAGAAGTGACCAGAATCGTTGTGCTAGCAAGCTACTTGCTGCCTACACAGATGGAGATGTCGAAGAAATCAAACGCATTGCTCAGTCAAGCGCTATTTCACATCTTGACCATGTGATCATTAGGCTTGCGAGGAAACTTCCAACAGGCGATGTGAGTGCATTAAAGGCTGACAATGCCGAAGATGGAGAGGAGCCACTTGATGAAAATGACCTGACTTGA 891 0.4355 MAASDPNKLMTKADKLTRLSLTRWSADWKSATVLYEQAANGFRVARDYEKAKIAYEKASKGQEMLSSPWDAAKHMESAAALAKDLSHWQEVGDFYRRASELYMECGRPQPASDALAKGARALEDSMSEEAIQLYTDACTILEDDGREQMAFDLYRAATNVYIKLEKYTDAASFMLRLGLAADKCNATNSQCKAYLSAIIIYLYAHDFKQAEKCYNDCSQIDAFLRSDQNRCASKLLAAYTDGDVEEIKRIAQSSAISHLDHVIIRLARKLPTGDVSALKADNAEDGEEPLDENDLT 296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1700 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 285 IPR000744 GO:0006886
Ssu1g1700 296 Pfam Soluble NSF attachment protein, SNAP 5 264 - -
Ssu1g1700 296 SUPERFAMILY TPR-like 6 249 IPR011990 GO:0005515
Ssu1g1700 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 285 - -
Ssu1g1700 296 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1700 K21198 - gmx:100790986 558.525
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1700 1 41713148 41722104 Ssu1g1700 1 41713148 41722104 ECH