Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1699 ATGACTAGATTTGAAGTGGTTTTCATCGCTACCCCAGCCCTCGGCAACCTCGTTCCCCTCGTGGAATTTGCCAACCTCCTAACCAAACGCGACCCTCGATTCTCTGCAACCGTTCTCACCATCTGCATGCCACAACGACCCCTCGTCAACGCCTTCGTCCAAGCCCGCGCTTCCCCAGCCACTAATCTCCGACTCCTTCATCTCCCTACCGTGGACCCGCCCACACCCGATCAGTACCAATCCTCCGTCGCTTTCCTCTCCCTCCACATACAGAACCACAAACACCACGTGAAACACGCCCTCCTCAATCTCATCCCCACCGCGTCAGACTCCGACTCGGTCCAACTCGCCGCCGTGTTCGTCGACATGTTCTGCACCGCCCTCATCGACGTCGCCGCCGAGCTCGCCGTCCCGTGCTACCTCTTCTTCGCGTCGCCGGCGAGTTTCCTCGGCTTCGCGCTCCACCTTCCCCGAGTCGACCCGGCCGAGTCGGAATCCGAGTTCAAGGTTCCGAGTTTTAAAAACCCTTTGCCCCGACCCGTTTTGCCCAACGTCGTGTTGGACGCGAATGACGGGTCCTCCTGGCTCTCATACCATGCGGGAAGGTACAGGAAAACCAAGGGCATTGTTGTAAATACGCTGCAAGAGCTTGAGCCTCACGCGCTTCAGTCACTCTACAACGATTCGCAGTTGCCACGCGTCTATCCTCTTGGGCCGGTTCTTGACCTTGTTGGATCGGCCCAATGGAATCCCAACCCGGCCCAGTACAAGCGTATAATGGAGTGGCTTAATCAGCAGCCTGCGTCTTCCGTTGTTTTTCTCTGTTTCGGTAGCATGGGAAGCCTGAAGGCAAACCAGGTTCTTGTGGCCTTGCGGGAGCCTCCAAAGGCCCAATTGGAAGACCCGAGAGATTACGCGGATCAGGTGGACGTGCTGCCAGATGGATTTTTAGAGCGAACGGTTGGGATTGGTTTGGTGTGTGGGTGGGTCCCACAAGCGAAGGTGCTGGCCCATGAAGCTGTAGGGGGGTTCTTGTCGCATTGTGGTTGGAACTCGTTATTGGAGAGTTTGTGGCATGGCGTGCCGGTTGCCACGTGGCCGTTGTTCGCAGAGCAGCAGATGAACGCGTTTCAGATGGCTAGGGAACTGGGATTGGCGGTGGAGATTAGGGTGGATTATAGGATAGGTGGGGATCTGGTGCGGGCGGAAGAAGTGGAGAAGGGCGTGAGGTCGCTGATGGAGGGTAGTGATGAGATCAGAAGAAAGGTGAAGGAGATGAGTGACAAGTGTAAAGGGGCGTTGATGGAGAACGGGTCATCATACAATAACCTTGTGTCCCTGATTCAAGAGTTGACAAGTTGA 1362 0.5609 MTRFEVVFIATPALGNLVPLVEFANLLTKRDPRFSATVLTICMPQRPLVNAFVQARASPATNLRLLHLPTVDPPTPDQYQSSVAFLSLHIQNHKHHVKHALLNLIPTASDSDSVQLAAVFVDMFCTALIDVAAELAVPCYLFFASPASFLGFALHLPRVDPAESESEFKVPSFKNPLPRPVLPNVVLDANDGSSWLSYHAGRYRKTKGIVVNTLQELEPHALQSLYNDSQLPRVYPLGPVLDLVGSAQWNPNPAQYKRIMEWLNQQPASSVVFLCFGSMGSLKANQVLVALREPPKAQLEDPRDYADQVDVLPDGFLERTVGIGLVCGWVPQAKVLAHEAVGGFLSHCGWNSLLESLWHGVPVATWPLFAEQQMNAFQMARELGLAVEIRVDYRIGGDLVRAEEVEKGVRSLMEGSDEIRRKVKEMSDKCKGALMENGSSYNNLVSLIQELTS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1699 453 Gene3D Glycogen Phosphorylase B; 248 432 - -
Ssu1g1699 453 PANTHER GLYCOSYLTRANSFERASE 4 452 - -
Ssu1g1699 453 Gene3D Glycogen Phosphorylase B; 7 444 - -
Ssu1g1699 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 235 391 IPR002213 GO:0008194
Ssu1g1699 453 PANTHER GLYCOSYLTRANSFERASE 4 452 - -
Ssu1g1699 453 ProSitePatterns UDP-glycosyltransferases signature. 329 372 IPR035595 -
Ssu1g1699 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 449 - -
Ssu1g1699 453 CDD GT1_Gtf-like 6 451 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1699 Ssu-Chr1 41675800 41677202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1699 3 452 Glycosyltransferase AT3G21760 41.700 7.58e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1699 - - gmx:100775567 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1699 1 41675800 41677202 Ssu1g1699 1 41675800 41677202 ECH