Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1677 ATGGAGGACcaaccatcatcatcatcatcaagatTAAAGACTGCTGTTTTGGATGCTCCCCTTCATTCAATCGGGTTCGAGTATGAAGACTTGTCACCACAAAAAGTCTCTGGCCGTCTCCTTGTCACCCAGAAGTGCTGCCAGCCATTTAAGGTGCTTCATGGAGGGGTATCAGCATTGATAGCGGAGTCTCTGGCAAGCATGGGAGCGCATATGGCTTCTGGTTATAAAAGGGTGGCTGGAATTCAGCTTAGCATCAACCATTTGAAACGAGCAGAGATGGGTGACTTGGTCCACGCCGAAGCTACACCTCTAAATGTTGGCAGAACCATTCAGGTCTTCCCCATATCCCTATTTCCCTTCATGTTatgtttatttcaatttatctgTAGTTCTTTTAAGATGATGCTGAACCATAATAAGCATAATATGAAATACACAATATCATAA 450 0.4044 MEDQPSSSSSRLKTAVLDAPLHSIGFEYEDLSPQKVSGRLLVTQKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVAGIQLSINHLKRAEMGDLVHAEATPLNVGRTIQVFPISLFPFMLCLFQFICSSFKMMLNHNKHNMKYTIS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1677 149 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 3 119 - -
Ssu1g1677 149 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 3 119 - -
Ssu1g1677 149 Gene3D Hotdog Thioesterase 6 120 - -
Ssu1g1677 149 CDD PaaI_thioesterase 24 119 - -
Ssu1g1677 149 TIGRFAM unchar_dom_1: uncharacterized domain 1 23 118 IPR003736 -
Ssu1g1677 149 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 22 119 IPR029069 -
Ssu1g1677 149 Pfam Thioesterase superfamily 51 117 IPR006683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1677 Ssu-Chr1 40776068 40776680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1677 K19222 - gmx:100527403 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1677 1 40776068 40776680 Ssu1g1677 1 40776068 40776680 ECH