Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1658 ATGTCGCCGTCCTCCGCCGACCACGGCGGAAACCACCGCTGCCCCCGGGAAGAAACCAACGGTTACGGCAATGACCACACCGAAATGCCCGTTCCTTCGACGGCGTCGTCGTCGTCGCTGCGCAGCATCGTCGACGCGGTTCCATCGAAGGAGCGGGAGAAGCTCCGGAGAATCCTCATCGCTTCGGCGAAGGGTTTCTCGATCGGAGCCGGCATCAAGGGCGGCCTCGCTCTCTTCGCGATCTTGGCACGATTGACGCGGAAAAAGCCGTCAagGAAGGGGATTGCTGTGACGAACGGCGAAGCAATTGTCGCGGCTCTGAAGGAAACGCTGAGATATGGTTTGTTTCTCGGAACCTTCGCCGGCACGTTCGTGTCCGCCGACGAGGTTATCGGTGCTCTCGCCGGTCACCGTAGGACAGCGAGGTGGAGGGCTCTGGTAGCAGGGGCGGTTGCAGGGTCGTCGATGCTTCTGACGGGGTTAGAGGATCAGCACACGAGTTTGGCGATCTACATTCTCATGCGTGCCGCTGTCTTGGCGTCTCGTTGTGGGATTAAGAGCAAACGGTTTGGGAAATATTGTAAGCCTCTCACGTGGAAGCACGGTGACATTTTCCTCATGTGTCTCTCCTCTTCACAAATATTGTCCGCTTATATATTAAAGCAAGACAGTTTGCCAGCTTCATATAAATCCTTTCTCAATAAACATGGTGGAAAGGATCCAGTTATCTTACAAGGTGTAAAAGATATAGCCAGTGGCAAGCCTTTCACTAATTTGGGTGCAATCGAGAAATACTACAAGACCATGGTTGTCGATGTGAAATTAAAACCAGATATGAAAGTTCCATGTTCGATTGTACATGGGAATCAATCATGCAGTGGACATgtcctttcttttctccttcaaGCTTACAAAAGAGCACTACCTGTTTATCTTCCGGTTTATCTGATACCTGCACTTATAGTTCATAGAAAAGGACTTTTAAAAAGGCCTTACACAATACTAGCCAAGGGTCTTTTTGGCACAGCAAGATCAAGCTTGTTTCTGTCTGTGTATTGCGCTTCTGCCTGGATGTGGACGTGCTTTCTTTTcagaatttttaaaagatgtaaCATTCCAATGGTGGCCATGGGAACGTTCCCAACTGGCCTTGCATTGGCCATTGAGAAGAAAAGCAGGCGAATAGAAATATCATTATACTGCCTTGCCCGGGCTATCGAGAGTTTCTTCACATGCGTAGCTGATGCAGGATATCTACCACAATCAAGAAAGATCAAGAGAGCTGATGTGGTGGTTTTCAGCTTGTCAACAGCCATCATAATGCATTGTTATGCAGAGGAGAGGGAAGTGTTTAGATCCAAATACTTAAATGTCCTTGATTGGGTATTTGGTGTACCTCCTCCTCCATGTGAAACCCCACGATGCAAAGATGGGTAG 1437 0.4788 MSPSSADHGGNHRCPREETNGYGNDHTEMPVPSTASSSSLRSIVDAVPSKEREKLRRILIASAKGFSIGAGIKGGLALFAILARLTRKKPSRKGIAVTNGEAIVAALKETLRYGLFLGTFAGTFVSADEVIGALAGHRRTARWRALVAGAVAGSSMLLTGLEDQHTSLAIYILMRAAVLASRCGIKSKRFGKYCKPLTWKHGDIFLMCLSSSQILSAYILKQDSLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLGAIEKYYKTMVVDVKLKPDMKVPCSIVHGNQSCSGHVLSFLLQAYKRALPVYLPVYLIPALIVHRKGLLKRPYTILAKGLFGTARSSLFLSVYCASAWMWTCFLFRIFKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESFFTCVADAGYLPQSRKIKRADVVVFSLSTAIIMHCYAEEREVFRSKYLNVLDWVFGVPPPPCETPRCKDG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1658 478 MobiDBLite consensus disorder prediction 1 40 - -
Ssu1g1658 478 PANTHER BNAANNG02190D PROTEIN 31 470 - -
Ssu1g1658 478 Pfam N-terminal cysteine-rich region of Transmembrane protein 135 290 411 IPR031926 -
Ssu1g1658 478 MobiDBLite consensus disorder prediction 26 40 - -
Ssu1g1658 478 PANTHER UNCHARACTERIZED 31 470 IPR026749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1658 Ssu-Chr1 39872577 39878384 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1658 - - gmx:100806036 874.004