Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1651 ATGACCGCGTCCAAGAGAAACTACAAAGAGAAACCAATTCGCCGCAAGGAAGAGAAAGCGGAAGAACCGGAAGTGCCGAAATACAGAGATCGAGCTAAGGAGCGTAGAGAAGATCAGAATCCTGATTATGAACAAACTGAGCTTGGATTTCATGCAGTTGCTCCTCCTGGTACTGTGGATCTTCGGTCATCTGATGCGCAcaaattatctattgagaagAGCAAGTACCTAGGAGGTGATGTGGAACATACACATTTGGTCAAAGGTTTGGATTATGCTTTGCTGAACAAAGTAAGAAGTGAGATAGATAAGAAACCAGAGGCTGGGGATGATGGTGATGGGAAATCCAGGTCATCCAAGGAAGACCAACAAGTATCAATTCGCACAGCAACTGCGAAGTCAGTTTATCAGTGGATAGTCAAGCCGCAGACCATTAGTAAAACAAATGAGATGTTCCTCCCTGGTCGaatgacatttatttttaacatgGAGGGTGGATACCATCATGATATTCCAACTACCTTGCACCGTAGTAAAGCTGACTGTCCAGTGCCAGAGGAAATGGTTACGGTTAATGTTGATGGATCTGTTCTAGATCGAATTGCTAAAATAATGTCATATCTTCGTCTTGGTTCTTCTGGGAAGAtcctaaagaagaaaaagaaggaaaaagatgcAAAAGGGAAGATTTTGGCGGTTGGTAATGGATATGACAAAGAGGATAAGCCATCAAAGGTTGAAGGTGGGGCAAAGAATCAAACTGAAAAAGAATTCATCCTGCCTCCTCCACCTCCCATAAAGAAAAATCCTCTTCATTTAAGAGAGAAACAAGGCCCAGCTGTTGCTAGAGCAGAAGATGATGACATTTTTGAAGGTGATGGTGTTGACTATGATATACCTGGTAAAGACTTGAGCCAAAGTCCTGTCTCTGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAACCTTCATATTTCACAGAACCTACTTATGGTCCTGTCCCACCTTCTATGCTTTCTCAAGGGTGGCAAGAAACAAATGGATACGATGTAATGCAAACACAAGCCTTGGCTGGTGGTTATCAAGGAGAGTGGCAGGAGTACCAGTATGCTGAACAACTGGCTTACCCAGATCAATATCTTCAGCCAAATATGCAGACTTATGATGTGCAAGCAGGTTTAAATCTTCCACAAGATCCACGCTTCATGACTCAAGAAGAGAAGGATCGAGGTTTAGGATCAGTGTTTAAGCGAGATGACCAGAGACTTCAACAGCTGAGGGAGAAAGATGCTCGTGAAAAAGATCCCAACTTCATCTCAGAGAGTTACTCTGAATGTTACCCAGGGTATCAAGAATATAACCGTGAAATAGTGGACAGTGATGATGAAGACGACTTATCCAAGATGGATATGGGTGGAAGGGCAAAGGGTCGTCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCCACTTATAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTCGGTGTGAAGATGCAAGATGGCCGGAAGACCCGAAAGCAAAACAAGGACCAGAAGCTCAATAACGATTTGCACAAGATCAATAAGATACTTGCCAGAAAGAAGATGGAAAAGGACACCAGTGGTGAGGGGGGCCATCATTATGATGATGAACCACAACCTGGGAAGAAGCTCCGAATATGA 1701 0.4215 MTASKRNYKEKPIRRKEEKAEEPEVPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDLRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPEAGDDGDGKSRSSKEDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIFNMEGGYHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDAKGKILAVGNGYDKEDKPSKVEGGAKNQTEKEFILPPPPPIKKNPLHLREKQGPAVARAEDDDIFEGDGVDYDIPGKDLSQSPVSEDMEESPRNKEKPSYFTEPTYGPVPPSMLSQGWQETNGYDVMQTQALAGGYQGEWQEYQYAEQLAYPDQYLQPNMQTYDVQAGLNLPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEKDTSGEGGHHYDDEPQPGKKLRI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1651 566 MobiDBLite consensus disorder prediction 103 126 - -
Ssu1g1651 566 Pfam RED-like protein C-terminal region 443 548 IPR012492 -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 539 566 - -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 103 122 - -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 234 252 - -
Ssu1g1651 566 PANTHER PROTEIN RED 5 565 - -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 512 531 - -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 1 44 - -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 234 342 - -
Ssu1g1651 566 Pfam RED-like protein N-terminal region 5 221 IPR012916 -
Ssu1g1651 566 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 5 565 IPR039896 -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 1 61 - -
Ssu1g1651 566 MobiDBLite consensus disorder prediction 269 288 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1651 K13109 - gmx:100775354 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1651 1 39598148 39603726 Ssu1g1651 1 39598148 39603726 ECH