Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1648 ATGTGTGCTAAACTTTTATTACATGCTGATACAGCTGAATATGCCAAGCTGCCACTAATTCCTCCGTTTTTACAACCAAATGCTGATTATAGTAACGGTGTTAACTTTGCTTCTGGTGGGGCCGGTGTTCTTGCTGAAACCAATCAGGGACTGGTGATTGATCTCCAAACACAATTAAGCCACTTTGAAGAAGTGAGAATATTATTGTCAGAAAAGCTTGGAGAGAAGAAGGCAAAGGGATTGATCTCAGAAGCAATTTATTTCATTAGCATAGGAAGCAACGATTACATGGGTGGTTATCTGGGTAACCCAAAAATGCAAGAAAGCTACAATCCTGAACAATATGTTTGGATGGTCATCGGAAACTTGACACGGGCAATCCAAACTCTTTATGGGAAAGGGGCTAGAAAGTTTGGGTTCTTAAGTTTGTCTCCTTTGGGTTGCTTGCCAGCTCTTAGAGCTCTAAACCCGGAAGCCAACAAAGGTGGTTGTTTTGAAGCAGCTTCTGCTCTTGCTCTAGCACATAATGAAGCTTTGAGTCTTGTTCTCACAAACCTCAAGCATGACCTTGAAGGATTCATGTACTCTAACTCTAATTTCTATTATTGGCTTCGAGAGAGAATAGATAACCCCACAAATTATGGTTTTAAGGATGGAGTTAATGCTTGCTGTGGAAGTGGACCATATGGAGGCATCTTCACTTGTGGGGGTACAAAGAAAGTTACAAAGTACAGCTTATGTGACAATGTTGGAGAGTATGTGTGGTGGGATTCTTTTCACGCAACAGAGAAGATCCATGAGCAATTCGCTAAGGCGTTATGGAATGGAGTCAATGGACCACCTTGCTCGGTAGGACCGTACAATTTAGAAAACTTCTTCTCCAACAACGAGATGATCAAACTCACTATTGCTGATGTAGTTGATGCACCAGAAACTCAGCAAGGACAATTTCACTACTga 960 0.4146 MCAKLLLHADTAEYAKLPLIPPFLQPNADYSNGVNFASGGAGVLAETNQGLVIDLQTQLSHFEEVRILLSEKLGEKKAKGLISEAIYFISIGSNDYMGGYLGNPKMQESYNPEQYVWMVIGNLTRAIQTLYGKGARKFGFLSLSPLGCLPALRALNPEANKGGCFEAASALALAHNEALSLVLTNLKHDLEGFMYSNSNFYYWLRERIDNPTNYGFKDGVNACCGSGPYGGIFTCGGTKKVTKYSLCDNVGEYVWWDSFHATEKIHEQFAKALWNGVNGPPCSVGPYNLENFFSNNEMIKLTIADVVDAPETQQGQFHY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1648 319 Pfam GDSL-like Lipase/Acylhydrolase 28 272 IPR001087 GO:0016788
Ssu1g1648 319 Gene3D SGNH hydrolase 6 280 IPR036514 -
Ssu1g1648 319 PANTHER - 12 306 - -
Ssu1g1648 319 SUPERFAMILY SGNH hydrolase 86 276 - -
Ssu1g1648 319 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 12 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1648 Ssu-Chr1 39573980 39575484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1648 12 293 Acyl Lipid Metabolism Gene Families AT4G10950 27.431 2.24e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1648 - - gmx:100801228 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1648 1 39573980 39575484 Ssu1g1648 1 39573980 39575484 ECH