Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1631 ATGGGAACGACGGACGAGGTCGTGGAAATAGAGAGGTTGGAGAAGAGTTTGTTGGAGGAGAATGAGCGAGACGAGGAAGAGGTGTTGTATGCGGCGTCGTTTCGAGAGATGGAACAGAATTTCGTCAAGTACCAGACGGTGCAGTGGGTTACAAGACCGGTGCCGTTTCCGTGTTTTGGGGTGCTGAAGAAAGAGAAGCACGTTTTGTTGCACTCTGTGGCAGATGTTGTGGTTGAACAAGGATACTTGCAATCACTTTTTGGAGTATATTCTCttagaattgaaaatattgGAGTTAGAAGGCCACCCAGTGATGATGTTCAAATCCAGGGCGTTGCAAACCCAAATGCTTTCAGGAAGGCTGTTATGATGCGTCTGTCAAGCATGAGAAATGAGATTCTGTCAAGACAGGTTTCTACGTTAGAAGATGCTCCACATTTGATGTCATTGAAACATGATTCTACTCCTTCTGGGGAGCTGCTACTACTGCAGAAGCTAGAGGAAGTTGGAAGCTCTGTCAAGGTAGAAAGTGAACATGAGATATAG 546 0.4487 MGTTDEVVEIERLEKSLLEENERDEEEVLYAASFREMEQNFVKYQTVQWVTRPVPFPCFGVLKKEKHVLLHSVADVVVEQGYLQSLFGVYSLRIENIGVRRPPSDDVQIQGVANPNAFRKAVMMRLSSMRNEILSRQVSTLEDAPHLMSLKHDSTPSGELLLLQKLEEVGSSVKVESEHEI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1631 181 PANTHER EXPRESSED PROTEIN 1 50 - -
Ssu1g1631 181 PANTHER EXPRESSED PROTEIN 50 175 - -
Ssu1g1631 181 Coils Coil 7 27 - -
Ssu1g1631 181 PANTHER EXPRESSED PROTEIN 1 50 - -
Ssu1g1631 181 PANTHER EXPRESSED PROTEIN 50 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1631 Ssu-Chr1 38993960 38995701 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1631 - - gmx:100815806 271.937